RNA–Protein interactions for RNA: ENST00000428064.5

LIMS1-208, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 2

Gene LIMS1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-208ENST00000428064 DIO2Q92813 273 aa19.26■□□□□ 0.67
LIMS1-208ENST00000428064 NTNG2Q96CW9 530 aa19.26■□□□□ 0.67
LIMS1-208ENST00000428064 NSUN5Q96P11 429 aaKnown RBP19.26■□□□□ 0.67
LIMS1-208ENST00000428064 FMO2Q99518 471 aa19.26■□□□□ 0.67
LIMS1-208ENST00000428064 MRPL57Q9BQC6 102 aaKnown RBP19.26■□□□□ 0.67
LIMS1-208ENST00000428064 ZNF559Q9BR84 538 aa19.26■□□□□ 0.67
LIMS1-208ENST00000428064 MRPL1Q9BYD6 325 aaKnown RBP19.26■□□□□ 0.67
LIMS1-208ENST00000428064 MRPL46Q9H2W6 279 aaKnown RBP19.26■□□□□ 0.67
LIMS1-208ENST00000428064 ELOVL6Q9H5J4 265 aa19.26■□□□□ 0.67
LIMS1-208ENST00000428064 BRF2Q9HAW0 419 aa19.26■□□□□ 0.67
LIMS1-208ENST00000428064 ITGB1BP2Q9UKP3 347 aa19.26■□□□□ 0.67
LIMS1-208ENST00000428064 NPFFR2Q9Y5X5 522 aa19.26■□□□□ 0.67
LIMS1-208ENST00000428064 CCDC168Q8NDH2 2452 aa19.26■□□□□ 0.67
LIMS1-208ENST00000428064 F8P00451 2351 aa19.25■□□□□ 0.67
LIMS1-208ENST00000428064 C1orf226A1L170 272 aa19.25■□□□□ 0.67
LIMS1-208ENST00000428064 GUCY1B2O75343 617 aa19.25■□□□□ 0.67
LIMS1-208ENST00000428064 OTCP00480 354 aa19.25■□□□□ 0.67
LIMS1-208ENST00000428064 CT62P0C5K7 136 aa19.25■□□□□ 0.67
LIMS1-208ENST00000428064 CPMP14384 443 aa19.25■□□□□ 0.67
LIMS1-208ENST00000428064 XKP51811 444 aa19.25■□□□□ 0.67
LIMS1-208ENST00000428064 RPP38P78345 283 aaKnown RBP19.25■□□□□ 0.67
LIMS1-208ENST00000428064 CCNYL2Q5T2Q4 361 aa19.25■□□□□ 0.67
LIMS1-208ENST00000428064 CES4AQ5XG92 561 aa19.25■□□□□ 0.67
LIMS1-208ENST00000428064 TMEM81Q6P7N7 255 aa19.25■□□□□ 0.67
LIMS1-208ENST00000428064 ULK2Q8IYT8 1036 aa19.25■□□□□ 0.67
LIMS1-208ENST00000428064 LIX1Q8N485 282 aa19.25■□□□□ 0.67
LIMS1-208ENST00000428064 OR4F6Q8NGB9 312 aa19.25■□□□□ 0.67
LIMS1-208ENST00000428064 ZNF483Q8TF39 744 aaPredicted RBP19.25■□□□□ 0.67
LIMS1-208ENST00000428064 ANGPTL4Q9BY76 406 aa19.25■□□□□ 0.67
LIMS1-208ENST00000428064 SLC6A15Q9H2J7 730 aa19.25■□□□□ 0.67
LIMS1-208ENST00000428064 UBQLN3Q9H347 655 aa19.25■□□□□ 0.67
LIMS1-208ENST00000428064 CES1P1Q9UKY3 287 aa19.25■□□□□ 0.67
LIMS1-208ENST00000428064 INTS1Q8N201 2190 aaKnown RBP19.25■□□□□ 0.67
LIMS1-208ENST00000428064 CDH16O75309 829 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 ATP1B1P05026 303 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 HPNP05981 417 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 PORP16435 677 aaPredicted RBP19.24■□□□□ 0.67
LIMS1-208ENST00000428064 GDF1P27539 372 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 ECHS1P30084 290 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 PEX19P40855 299 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 MAPK12P53778 367 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 FBXW4P57775 412 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 SLC48A1Q6P1K1 146 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 COMMD6Q7Z4G1 85 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 MILR1Q7Z6M3 343 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 LIX1LQ8IVB5 337 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 DCAKDQ8WVC6 231 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 JSRP1Q96MG2 331 aaPredicted RBP19.24■□□□□ 0.67
LIMS1-208ENST00000428064 RILPQ96NA2 401 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 DMGDHQ9UI17 866 aaKnown RBP19.24■□□□□ 0.67
LIMS1-208ENST00000428064 CFL2Q9Y281 166 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 L3MBTL1Q9Y468 752 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 PCDHA9Q9Y5H5 950 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 HIVEP1P15822 2718 aa19.24■□□□□ 0.67
LIMS1-208ENST00000428064 GOLGA6L10A6NI86 522 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 HSPB2A8KAH6 182 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 AHRRA9YTQ3 701 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 NAGAP17050 411 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 S1PR1P21453 382 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 GPX3P22352 226 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 CRYZQ08257 329 aaKnown RBP19.23■□□□□ 0.67
LIMS1-208ENST00000428064 GALNT1Q10472 559 aaPredicted RBP19.23■□□□□ 0.67
LIMS1-208ENST00000428064 MAP4K2Q12851 820 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 DUSP8Q13202 625 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 HSPB2Q16082 182 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 PRICKLE4Q2TBC4 344 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 NHSL2Q5HYW2 709 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 FNDC7Q5VTL7 733 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 VWA5B2Q8N398 1253 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 TMEM151AQ8N4L1 468 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 TMEM41AQ96HV5 264 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 PRDM14Q9GZV8 571 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 TRPS1Q9UHF7 1281 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 SNX6Q9UNH7 406 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 C15orf41Q9Y2V0 281 aa19.23■□□□□ 0.67
LIMS1-208ENST00000428064 A8MT66 165 aa19.22■□□□□ 0.67
LIMS1-208ENST00000428064 URI1O94763 535 aaPredicted RBP19.22■□□□□ 0.67
LIMS1-208ENST00000428064 LRATO95237 230 aa19.22■□□□□ 0.67
LIMS1-208ENST00000428064 SBK3P0C264 359 aa19.22■□□□□ 0.67
LIMS1-208ENST00000428064 NT5EP21589 574 aa19.22■□□□□ 0.67
LIMS1-208ENST00000428064 ABCD3P28288 659 aa19.22■□□□□ 0.67
LIMS1-208ENST00000428064 CASP3P42574 277 aa19.22■□□□□ 0.67
LIMS1-208ENST00000428064 CDK9P50750 372 aaKnown RBP19.22■□□□□ 0.67
LIMS1-208ENST00000428064 RIPPLY3P57055 190 aa19.22■□□□□ 0.67
LIMS1-208ENST00000428064 GLE1Q53GS7 698 aaKnown RBP19.22■□□□□ 0.67
LIMS1-208ENST00000428064 LETMD1Q6P1Q0 360 aa19.22■□□□□ 0.67
LIMS1-208ENST00000428064 SEM1Q6ZVN7 128 aa19.22■□□□□ 0.67
LIMS1-208ENST00000428064 PACS2Q86VP3 889 aa19.22■□□□□ 0.67
LIMS1-208ENST00000428064 PM20D2Q8IYS1 436 aa19.22■□□□□ 0.67
LIMS1-208ENST00000428064 NMRK1Q9NWW6 199 aa19.22■□□□□ 0.67
LIMS1-208ENST00000428064 ALKBH4Q9NXW9 302 aa19.22■□□□□ 0.67
LIMS1-208ENST00000428064 ZNF639Q9UID6 485 aa19.22■□□□□ 0.67
LIMS1-208ENST00000428064 SLC12A4Q9UP95 1085 aa19.22■□□□□ 0.67
LIMS1-208ENST00000428064 A0A087WUV0 522 aaPredicted RBP19.21■□□□□ 0.67
LIMS1-208ENST00000428064 A0A1B0GTL3 188 aa19.21■□□□□ 0.67
LIMS1-208ENST00000428064 TRIM49D1C9J1S8 452 aa19.21■□□□□ 0.67
LIMS1-208ENST00000428064 EPPINO95925 133 aa19.21■□□□□ 0.67
LIMS1-208ENST00000428064 PDYNP01213 254 aa19.21■□□□□ 0.67
LIMS1-208ENST00000428064 HSD3B1P14060 373 aa19.21■□□□□ 0.67
LIMS1-208ENST00000428064 HSD3B2P26439 372 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms