RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 ARPC5O15511 151 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 THEGLP0DJG4 465 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 CAPN3P20807 821 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 CNR2P34972 360 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 UGT2B10P36537 528 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 BMPR1AP36894 532 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 INCA1Q0VD86 236 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 POU4F3Q15319 338 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 FAM214AQ32MH5 1076 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 KANK2Q63ZY3 851 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 ZNF767PQ75MW2 155 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 TP53INP2Q8IXH6 220 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 ZC3H3Q8IXZ2 948 aaKnown RBP13.84□□□□□ -0.19
PTPRU-204ENST00000428026 PNPLA1Q8N8W4 532 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 SMARCD2Q92925 531 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 TREX2Q9BQ50 279 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-204ENST00000428026 B4GALT6Q9UBX8 382 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 FAM163BP0C2L3 166 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 ETFAP13804 333 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 HSD17B1P14061 328 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 PRKXP51817 358 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 DECR1Q16698 335 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 TBC1D25Q3MII6 688 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 CGB2Q6NT52 195 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 TXLNGYQ9BZA5 131 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 SLA2Q9H6Q3 261 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 SRA1Q9HD15 236 aaKnown RBP13.84□□□□□ -0.19
PTPRU-204ENST00000428026 MAN2C1Q9NTJ4 1040 aa13.84□□□□□ -0.19
PTPRU-204ENST00000428026 M0R129 80 aa13.83□□□□□ -0.19
PTPRU-204ENST00000428026 TYRP14679 529 aa13.83□□□□□ -0.19
PTPRU-204ENST00000428026 PTH2RP49190 550 aa13.83□□□□□ -0.19
PTPRU-204ENST00000428026 ATAD3CQ5T2N8 411 aa13.83□□□□□ -0.19
PTPRU-204ENST00000428026 Q6ZVL8 140 aa13.83□□□□□ -0.19
PTPRU-204ENST00000428026 NOXA1Q86UR1 476 aa13.83□□□□□ -0.19
PTPRU-204ENST00000428026 BBS10Q8TAM1 723 aa13.83□□□□□ -0.19
PTPRU-204ENST00000428026 THAP4Q8WY91 577 aa13.83□□□□□ -0.19
PTPRU-204ENST00000428026 UTP4Q969X6 686 aaKnown RBP13.83□□□□□ -0.19
PTPRU-204ENST00000428026 KCNK12Q9HB15 430 aa13.83□□□□□ -0.19
PTPRU-204ENST00000428026 RABL2AQ9UBK7 228 aaPredicted RBP13.83□□□□□ -0.19
PTPRU-204ENST00000428026 CLEC4EQ9ULY5 219 aa13.83□□□□□ -0.19
PTPRU-204ENST00000428026 STYXL1Q9Y6J8 313 aa13.83□□□□□ -0.19
PTPRU-204ENST00000428026 A0A1W2PPL8 197 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 LEFTY2O00292 366 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 OXTRP30559 389 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 LY6G5CQ5SRR4 150 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 PSAPL1Q6NUJ1 521 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 RHEBL1Q8TAI7 183 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 KCNN1Q92952 543 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 AP1S3Q96PC3 154 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 ASF1BQ9NVP2 202 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 IGKV6D-21A0A0A0MT36 114 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 A0A0A6YYH2 397 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 A6NJ64 397 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 H7C417 338 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 PAK4O96013 591 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-204ENST00000428026 PLGP00747 810 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-204ENST00000428026 S1PR1P21453 382 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 HOXA11P31270 313 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-204ENST00000428026 FLYWCH1Q4VC44 716 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 TSPYL5Q86VY4 417 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-204ENST00000428026 OR6N1Q8NGY5 312 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 SCAMP4Q969E2 229 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 ELMOD3Q96FG2 381 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 POTEKPQ9BYX7 375 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 OR51E2Q9H255 320 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 R3HDMLQ9H3Y0 253 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 SAGE1Q9NXZ1 904 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 KLRF1Q9NZS2 232 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 NDUFAF4Q9P032 175 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 F8W036 122 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 AHSA1O95433 338 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 HTR6P50406 440 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 BLOC1S1P78537 153 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 CDK5R2Q13319 367 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 FAM180BQ6P0A1 224 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 OR5T1Q8NG75 326 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.83□□□□□ -0.25e-7■□□□□ 10
PTPRU-204ENST00000428026 SDHAF3Q9NRP4 125 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 EPHA6Q9UF33 1036 aa13.83□□□□□ -0.2
PTPRU-204ENST00000428026 WASHC1A8K0Z3 465 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 PAHP00439 452 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 RETP07949 1114 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 FHP07954 510 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 RHCEP18577 417 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 TIA1P31483 386 aaKnown RBP eCLIP13.82□□□□□ -0.23e-7■□□□□ 8.7
PTPRU-204ENST00000428026 MLLT3P42568 568 aaPredicted RBP13.82□□□□□ -0.2
PTPRU-204ENST00000428026 FRKP42685 505 aaPredicted RBP13.82□□□□□ -0.2
PTPRU-204ENST00000428026 ERVK-25P63136 954 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 FAM189A2Q15884 450 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 RTP2Q5QGT7 225 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 SLC29A4Q7RTT9 530 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 TMEM135Q86UB9 458 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 C3orf58Q8NDZ4 430 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 HCAR2Q8TDS4 363 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 DZANK1Q9NVP4 752 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 RABL2BQ9UNT1 228 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 OARD1Q9Y530 152 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 GP1BBP13224 206 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 MAGEA3P43357 314 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 ARSDP51689 593 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms