RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CDH15P55291 814 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 NPRL3Q12980 569 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 FAM199XQ6PEV8 388 aaPredicted RBP13.83□□□□□ -0.2
PTPN13-203ENST00000427191 IL17RCQ8NAC3 791 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 ZNF419Q96HQ0 510 aaPredicted RBP13.83□□□□□ -0.2
PTPN13-203ENST00000427191 KCNJ16Q9NPI9 418 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 SPANXN4Q5MJ08 99 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 MGLLQ99685 303 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 CACNG6Q9BXT2 260 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 OR2S2Q9NQN1 319 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 OTOL1A6NHN0 477 aaPredicted RBP13.82□□□□□ -0.2
PTPN13-203ENST00000427191 EIF3FO00303 357 aaPredicted RBP13.82□□□□□ -0.2
PTPN13-203ENST00000427191 CSF2P04141 144 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 BDKRB2P30411 391 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 GCGRP47871 477 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 KIAA0895LQ68EN5 471 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 FZD1Q9UP38 647 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 COL3A1P02461 1466 aaPredicted RBP13.82□□□□□ -0.2
PTPN13-203ENST00000427191 GRXCR2A6NFK2 248 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 GPR137BO60478 399 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 F5H5P2 479 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 CDK1P06493 297 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 MYF6P23409 242 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 TIA1P31483 386 aaKnown RBP eCLIP13.82□□□□□ -0.2
PTPN13-203ENST00000427191 ELOCQ15369 112 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 SVBPQ8N300 66 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 CERS5Q8N5B7 392 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 C1orf74Q96LT6 269 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 TMEM63AO94886 807 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 ADAP00813 363 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 C12orf45Q8N5I9 185 aaPredicted RBP13.82□□□□□ -0.2
PTPN13-203ENST00000427191 MAL2Q969L2 176 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 SGTBQ96EQ0 304 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 ZNF436Q9C0F3 470 aaPredicted RBP13.82□□□□□ -0.2
PTPN13-203ENST00000427191 FBXL12Q9NXK8 326 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 LOC730098B7Z3J9 87 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 POP7O75817 140 aaKnown RBP13.82□□□□□ -0.2
PTPN13-203ENST00000427191 PLATP00750 562 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 AK4P27144 223 aaPredicted RBP13.82□□□□□ -0.2
PTPN13-203ENST00000427191 PROX2Q3B8N5 592 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 ZDHHC24Q6UX98 284 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 SYT14Q8NB59 555 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 OR10T2Q8NGX3 314 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 SH3RF2Q8TEC5 729 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 ZNF587Q96SQ5 575 aaPredicted RBP13.82□□□□□ -0.2
PTPN13-203ENST00000427191 PPP4R1LQ9P1A2 415 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 MYBPHLA2RUH7 354 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 ACOT7O00154 380 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 TP53P04637 393 aaPredicted RBP13.82□□□□□ -0.2
PTPN13-203ENST00000427191 RAB3BP20337 219 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 CD97P48960 835 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 OR52E8Q6IFG1 317 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 COQ10AQ96MF6 247 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 BTBD2Q9BX70 525 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 PPA2Q9H2U2 334 aa13.82□□□□□ -0.2
PTPN13-203ENST00000427191 CREB1P16220 341 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 GGT2P36268 569 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 ABHD12BQ7Z5M8 362 aaPredicted RBP13.81□□□□□ -0.2
PTPN13-203ENST00000427191 TFAP2BQ92481 460 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 RNF212BA8MTL3 300 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 UGT2B7P16662 529 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 RPL23AP62750 156 aaKnown RBP13.81□□□□□ -0.2
PTPN13-203ENST00000427191 RPS21P63220 83 aaKnown RBP13.81□□□□□ -0.2
PTPN13-203ENST00000427191 ANKRD54Q6NXT1 300 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 MAMDC2Q7Z304 686 aaPredicted RBP13.81□□□□□ -0.2
PTPN13-203ENST00000427191 VWA5B2Q8N398 1253 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 HMGB4Q8WW32 186 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 SPRYD4Q8WW59 207 aaPredicted RBP13.81□□□□□ -0.2
PTPN13-203ENST00000427191 GFOD1Q9NXC2 390 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 ADH7P40394 386 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 ODF4Q2M2E3 257 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 CCNJQ5T5M9 372 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 SERINC5Q86VE9 423 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 RPL10LQ96L21 214 aaKnown RBP13.81□□□□□ -0.2
PTPN13-203ENST00000427191 PDE7BQ9NP56 450 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 PRTFDC1Q9NRG1 225 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 RNF19AQ9NV58 838 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 CHRNB1P11230 501 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 WASP42768 502 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 MTNR1AP48039 350 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 FLT3LGP49771 235 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 ZNF100Q8IYN0 542 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 NDRG1Q92597 394 aaKnown RBP13.81□□□□□ -0.2
PTPN13-203ENST00000427191 PLSCR1O15162 318 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 UAP1L1Q3KQV9 507 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 AWAT2Q6E213 333 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 TTC24A2A3L6 582 aaPredicted RBP13.81□□□□□ -0.2
PTPN13-203ENST00000427191 UBFD1O14562 309 aaKnown RBP13.81□□□□□ -0.2
PTPN13-203ENST00000427191 NPC1O15118 1278 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 GPR37L1O60883 481 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 TFP02787 698 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 HBQ1P09105 142 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 FGL2Q14314 439 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 MANEALQ5VSG8 457 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 C22orf42Q6IC83 251 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 TMEM53Q6P2H8 277 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 OR13C4Q8NGS5 318 aa13.81□□□□□ -0.2
PTPN13-203ENST00000427191 FOXRED1Q96CU9 486 aaPredicted RBP13.81□□□□□ -0.2
PTPN13-203ENST00000427191 TP63Q9H3D4 680 aaPredicted RBP13.81□□□□□ -0.2
PTPN13-203ENST00000427191 ARGFXA6NJG6 315 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms