RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 LIX1Q8N485 282 aa6.91□□□□□ -1.3
LINC01049-201ENST00000426840 FNDC5Q8NAU1 212 aa6.91□□□□□ -1.3
LINC01049-201ENST00000426840 APCDD1LQ8NCL9 501 aa6.91□□□□□ -1.3
LINC01049-201ENST00000426840 M1APQ8TC57 530 aa6.91□□□□□ -1.3
LINC01049-201ENST00000426840 ELP5Q8TE02 316 aa6.91□□□□□ -1.3
LINC01049-201ENST00000426840 DOK4Q8TEW6 326 aa6.91□□□□□ -1.3
LINC01049-201ENST00000426840 CNRIP1Q96F85 164 aaPredicted RBP6.91□□□□□ -1.3
LINC01049-201ENST00000426840 WBP1Q96G27 269 aa6.91□□□□□ -1.3
LINC01049-201ENST00000426840 TSSK3Q96PN8 268 aa6.91□□□□□ -1.3
LINC01049-201ENST00000426840 LPAR4Q99677 370 aa6.91□□□□□ -1.3
LINC01049-201ENST00000426840 CCDC134Q9H6E4 229 aa6.91□□□□□ -1.3
LINC01049-201ENST00000426840 ZNF552Q9H707 407 aaPredicted RBP6.91□□□□□ -1.3
LINC01049-201ENST00000426840 ADAP2Q9NPF8 381 aa6.91□□□□□ -1.3
LINC01049-201ENST00000426840 ASIC5Q9NY37 505 aa6.91□□□□□ -1.3
LINC01049-201ENST00000426840 FAM53CQ9NYF3 392 aa6.91□□□□□ -1.3
LINC01049-201ENST00000426840 EHD3Q9NZN3 535 aa6.91□□□□□ -1.3
LINC01049-201ENST00000426840 PSME2Q9UL46 239 aa6.91□□□□□ -1.3
LINC01049-201ENST00000426840 USH1CQ9Y6N9 552 aa6.91□□□□□ -1.3
LINC01049-201ENST00000426840 GOLGA8QA0A0J9YX86 632 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 GOLGA8OA6NCC3 632 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 A6NL46 340 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 MYO1GB0I1T2 1018 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 GOLGA8NF8WBI6 632 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 K7EM74 188 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 ANKRD28O15084 1053 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 AKAP10O43572 662 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 ERAL1O75616 437 aaKnown RBP6.9□□□□□ -1.3
LINC01049-201ENST00000426840 TGDSO95455 350 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 DDAH2O95865 285 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 ALDOCP09972 364 aaKnown RBP6.9□□□□□ -1.3
LINC01049-201ENST00000426840 CT62P0C5K7 136 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 ITGAMP11215 1152 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 G6PDP11413 515 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 TNNI3P19429 210 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 CSNK2A2P19784 350 aaPredicted RBP6.9□□□□□ -1.3
LINC01049-201ENST00000426840 S1PR1P21453 382 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 ASMTP46597 345 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 ALDH9A1P49189 494 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 DIO3P55073 304 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 POLE2P56282 527 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 CLDN8P56748 225 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 ERVK-8P63133 956 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 GUCY1A3Q02108 690 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 MAP4K2Q12851 820 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 MAD2L1Q13257 205 aaPredicted RBP6.9□□□□□ -1.3
LINC01049-201ENST00000426840 PDE7AQ13946 482 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 MYBPC3Q14896 1274 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 TERF2Q15554 542 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 EXT1Q16394 746 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 MPEG1Q2M385 716 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 BTBD16Q32M84 506 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 ZNF385BQ569K4 471 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 OGFOD2Q6N063 350 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 SPATA19Q7Z5L4 167 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 TICAM1Q8IUC6 712 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 RIMKLAQ8IXN7 391 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 GALNT16Q8N428 558 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 ZNF321PQ8N8H1 164 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 CLEC1AQ8NC01 280 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 MORN4Q8NDC4 146 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 FDCSPQ8NFU4 85 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 CLHC1Q8NHS4 586 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 ACTRT2Q8TDY3 377 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 ZNF721Q8TF20 911 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 GFM2Q969S9 779 aaKnown RBP6.9□□□□□ -1.3
LINC01049-201ENST00000426840 COQ8BQ96D53 544 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 RBM18Q96H35 190 aaKnown RBP6.9□□□□□ -1.3
LINC01049-201ENST00000426840 ZNF764Q96H86 408 aaPredicted RBP6.9□□□□□ -1.3
LINC01049-201ENST00000426840 SENP5Q96HI0 755 aaPredicted RBP6.9□□□□□ -1.3
LINC01049-201ENST00000426840 FAM46AQ96IP4 442 aaKnown RBP6.9□□□□□ -1.3
LINC01049-201ENST00000426840 THOC3Q96J01 351 aaKnown RBP6.9□□□□□ -1.3
LINC01049-201ENST00000426840 DGAT2Q96PD7 388 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 OR52B2Q96RD2 323 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 PELOQ9BRX2 385 aaKnown RBP6.9□□□□□ -1.3
LINC01049-201ENST00000426840 C1orf50Q9BV19 199 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 NUDT9Q9BW91 350 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 SEMA4CQ9C0C4 833 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 LHPPQ9H008 270 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 REEP4Q9H6H4 257 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 CXorf21Q9HAI6 301 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 KCNK13Q9HB14 408 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 MMP25Q9NPA2 562 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 SLC35C2Q9NQQ7 365 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 ATP6V1HQ9UI12 483 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 ZNF639Q9UID6 485 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 ZNF223Q9UK11 482 aaPredicted RBP6.9□□□□□ -1.3
LINC01049-201ENST00000426840 UTS2RQ9UKP6 389 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 EIF3LQ9Y262 564 aaKnown RBP6.9□□□□□ -1.3
LINC01049-201ENST00000426840 PCDHGA9Q9Y5G4 932 aaKnown RBP6.9□□□□□ -1.3
LINC01049-201ENST00000426840 CLCA3PQ9Y6N3 262 aa6.9□□□□□ -1.3
LINC01049-201ENST00000426840 TMEM200CA6NKL6 621 aa6.89□□□□□ -1.31
LINC01049-201ENST00000426840 C17orf105B2RV13 164 aa6.89□□□□□ -1.31
LINC01049-201ENST00000426840 MKRN2OSH3BPM6 223 aa6.89□□□□□ -1.31
LINC01049-201ENST00000426840 HRKO00198 91 aa6.89□□□□□ -1.31
LINC01049-201ENST00000426840 PRKNO60260 465 aaPredicted RBP6.89□□□□□ -1.31
LINC01049-201ENST00000426840 LRATO95237 230 aa6.89□□□□□ -1.31
LINC01049-201ENST00000426840 CLPSP04118 112 aa6.89□□□□□ -1.31
LINC01049-201ENST00000426840 IGKV3-11P04433 115 aa6.89□□□□□ -1.31
LINC01049-201ENST00000426840 ATP1B1P05026 303 aa6.89□□□□□ -1.31
LINC01049-201ENST00000426840 FAM87AP0C7U9 286 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms