RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 CNTRLQ7Z7A1 2325 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 C2orf92A0A1B0GVN3 265 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 ATP6AP2A0A1C7CYW4 349 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 PEX11AO75192 247 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 ATP6AP2O75787 350 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 CBX6O95503 412 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 CRYABP02511 175 aaKnown RBP16.68■□□□□ 0.26
HERC3-205ENST00000426683 SDC1P18827 310 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 S1PR1P21453 382 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 CEBPEQ15744 281 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 PRSS53Q2L4Q9 553 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 ZNF324BQ6AW86 544 aaPredicted RBP16.68■□□□□ 0.26
HERC3-205ENST00000426683 OPN5Q6U736 354 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 HDXQ7Z353 690 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 MDGA2Q7Z553 956 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.68■□□□□ 0.26
HERC3-205ENST00000426683 OR9A2Q8NGT5 310 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 DNAJB8Q8NHS0 232 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 GFM2Q969S9 779 aaKnown RBP16.68■□□□□ 0.26
HERC3-205ENST00000426683 C3orf30Q96M34 536 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 BBS4Q96RK4 519 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 SORT1Q99523 831 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 CCT7Q99832 543 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 TIMMDC1Q9NPL8 285 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 BCAP29Q9UHQ4 241 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 ZNF639Q9UID6 485 aa16.68■□□□□ 0.26
HERC3-205ENST00000426683 EXO1Q9UQ84 846 aaKnown RBP16.68■□□□□ 0.26
HERC3-205ENST00000426683 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.68■□□□□ 0.26
HERC3-205ENST00000426683 KLF13Q9Y2Y9 288 aaPredicted RBP16.68■□□□□ 0.26
HERC3-205ENST00000426683 SNUPNO95149 360 aaKnown RBP16.67■□□□□ 0.26
HERC3-205ENST00000426683 NADKO95544 446 aaPredicted RBP16.67■□□□□ 0.26
HERC3-205ENST00000426683 EDN3P14138 238 aa16.67■□□□□ 0.26
HERC3-205ENST00000426683 PCSK2P16519 638 aa16.67■□□□□ 0.26
HERC3-205ENST00000426683 SOX18P35713 384 aa16.67■□□□□ 0.26
HERC3-205ENST00000426683 MRPS35P82673 323 aaKnown RBP16.67■□□□□ 0.26
HERC3-205ENST00000426683 BST1Q10588 318 aa16.67■□□□□ 0.26
HERC3-205ENST00000426683 EXOSC7Q15024 291 aaKnown RBP16.67■□□□□ 0.26
HERC3-205ENST00000426683 ATP6AP1LQ52LC2 224 aa16.67■□□□□ 0.26
HERC3-205ENST00000426683 TRMT12Q53H54 448 aaKnown RBP16.67■□□□□ 0.26
HERC3-205ENST00000426683 ZNF628Q5EBL2 1059 aa16.67■□□□□ 0.26
HERC3-205ENST00000426683 HLA-DQA1Q5Y7H0 255 aa16.67■□□□□ 0.26
HERC3-205ENST00000426683 SLC15A4Q8N697 577 aa16.67■□□□□ 0.26
HERC3-205ENST00000426683 ST6GALNAC3Q8NDV1 305 aa16.67■□□□□ 0.26
HERC3-205ENST00000426683 C16orf52Q8NHV5 167 aa16.67■□□□□ 0.26
HERC3-205ENST00000426683 ZNF675Q8TD23 568 aa16.67■□□□□ 0.26
HERC3-205ENST00000426683 NR4A3Q92570 626 aa16.67■□□□□ 0.26
HERC3-205ENST00000426683 CTHRC1Q96CG8 243 aa16.67■□□□□ 0.26
HERC3-205ENST00000426683 TSSK3Q96PN8 268 aa16.67■□□□□ 0.26
HERC3-205ENST00000426683 SLX1AQ9BQ83 275 aa16.67■□□□□ 0.26
HERC3-205ENST00000426683 ASPDHA6ND91 283 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 ANKUB1A6NFN9 424 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 MYO1GB0I1T2 1018 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 AKAP10O43572 662 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 LRATO95237 230 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 CBX7O95931 251 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 JUNP05412 331 aaKnown RBP16.66■□□□□ 0.26
HERC3-205ENST00000426683 MST1P26927 711 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 MAPK1P28482 360 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 MPIP34949 423 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 RPL14P50914 215 aaKnown RBP16.66■□□□□ 0.26
HERC3-205ENST00000426683 NR0B1P51843 470 aaKnown RBP16.66■□□□□ 0.26
HERC3-205ENST00000426683 DUSP8Q13202 625 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 ELOAQ14241 798 aaKnown RBP16.66■□□□□ 0.26
HERC3-205ENST00000426683 PDCD2Q16342 344 aaPredicted RBP16.66■□□□□ 0.26
HERC3-205ENST00000426683 LYPD8Q6UX82 237 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 RTL4Q6ZR62 310 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 SULF2Q8IWU5 870 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 FAM9CQ8IZT9 166 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 ZNF441Q8N8Z8 693 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 PSD4Q8NDX1 1056 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 SIMC1Q8NDZ2 872 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 OR52R1Q8NGF1 315 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 CLHC1Q8NHS4 586 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 KAT2AQ92830 837 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 TP53INP1Q96A56 240 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 TUBGCP3Q96CW5 907 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 FRMD6Q96NE9 622 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 TAS2R7Q9NYW3 318 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 BAIAP2L1Q9UHR4 511 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 CFL2Q9Y281 166 aa16.66■□□□□ 0.26
HERC3-205ENST00000426683 SHANK1Q9Y566 2161 aa16.65■□□□□ 0.26
HERC3-205ENST00000426683 KLRC4-KLRK1H3BQV0 150 aa16.65■□□□□ 0.26
HERC3-205ENST00000426683 PEX1O43933 1283 aa16.65■□□□□ 0.26
HERC3-205ENST00000426683 BCKDHAP12694 445 aa16.65■□□□□ 0.26
HERC3-205ENST00000426683 GPX3P22352 226 aa16.65■□□□□ 0.26
HERC3-205ENST00000426683 NTSP30990 170 aa16.65■□□□□ 0.26
HERC3-205ENST00000426683 MEOX1P50221 254 aa16.65■□□□□ 0.26
HERC3-205ENST00000426683 TDGF1P3P51864 188 aa16.65■□□□□ 0.26
HERC3-205ENST00000426683 NCBP2P52298 156 aaKnown RBP eCLIP16.65■□□□□ 0.26
HERC3-205ENST00000426683 GPR85P60893 370 aa16.65■□□□□ 0.26
HERC3-205ENST00000426683 EIF2S3LQ2VIR3 472 aaKnown RBP16.65■□□□□ 0.26
HERC3-205ENST00000426683 ZNF791Q3KP31 576 aaPredicted RBP16.65■□□□□ 0.26
HERC3-205ENST00000426683 C6orf136Q5SQH8 315 aa16.65■□□□□ 0.26
HERC3-205ENST00000426683 ANKRD26P1Q6NSI1 321 aa16.65■□□□□ 0.26
HERC3-205ENST00000426683 KIRREL3Q8IZU9 778 aa16.65■□□□□ 0.26
HERC3-205ENST00000426683 TAGAPQ8N103 731 aa16.65■□□□□ 0.26
HERC3-205ENST00000426683 CPSF7Q8N684 471 aaKnown RBP16.65■□□□□ 0.26
HERC3-205ENST00000426683 FNDC5Q8NAU1 212 aa16.65■□□□□ 0.26
HERC3-205ENST00000426683 GOLM1Q8NBJ4 401 aa16.65■□□□□ 0.26
HERC3-205ENST00000426683 ADIPOR1Q96A54 375 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms