RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 PLOD3O60568 738 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 MFN2O95140 757 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 NELFEP18615 380 aaKnown RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 IST1P53990 364 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 MRPS35P82673 323 aaKnown RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 FUT5Q11128 374 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 DAG1Q14118 895 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 GNA13Q14344 377 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 KCNAB1Q14722 419 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 IFI44LQ53G44 452 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 SHQ1Q6PI26 577 aaKnown RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 FAM111BQ6SJ93 734 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 OR5K1Q8NHB7 308 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 MAGEE2Q8TD90 523 aaPredicted RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 APOBEC4Q8WW27 367 aaKnown RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 XAGE5Q8WWM1 108 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 N4BP2L2Q92802 583 aaPredicted RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 COL26A1Q96A83 441 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 CTHRC1Q96CG8 243 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 MVB12AQ96EY5 273 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 RDH12Q96NR8 316 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 COL25A1Q9BXS0 654 aaPredicted RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 ACTRT3Q9BYD9 372 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 ANKRD60Q9BZ19 345 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 SPRTNQ9H040 489 aaPredicted RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 THSD1Q9NS62 852 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 SMPD3Q9NY59 655 aaPredicted RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 USE1Q9NZ43 259 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 NDUFAF4Q9P032 175 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 PDP2Q9P2J9 529 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 BAG5Q9UL15 447 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 RAB23Q9ULC3 237 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 SLC6A14Q9UN76 642 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 PATE3B3GLJ2 98 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 PCDHGA12O60330 932 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 CER1O95813 267 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 SLC35E2P0CK97 266 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 CRISP3P54108 245 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 IGLV3-21P80748 117 aaPredicted RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 COL9A2Q14055 689 aaPredicted RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 PDK3Q15120 406 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 SYPL1Q16563 259 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 DUSP7Q16829 419 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 PRICKLE4Q2TBC4 344 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 FAM214AQ32MH5 1076 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 RPS26P11Q5JNZ5 115 aaPredicted RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 EXOSC6Q5RKV6 272 aaKnown RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 OTUD3Q5T2D3 398 aaPredicted RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 MFSD12Q6NUT3 480 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 GUSBP11Q6P575 273 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 TMEM71Q6P5X7 295 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 MED25Q71SY5 747 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 BMP8AQ7Z5Y6 402 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 TMEM179BQ7Z7N9 219 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 STK32CQ86UX6 486 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 CARM1Q86X55 608 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 HIPK1Q86Z02 1210 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 ZNF595Q8IYB9 648 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 RASSF5Q8WWW0 418 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 GEMIN6Q8WXD5 167 aaKnown RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 SDCCAG3Q96C92 435 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 NRBF2Q96F24 287 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 C16orf58Q96GQ5 468 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 OR7D2Q96RA2 312 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 NUDT22Q9BRQ3 303 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 BTBD2Q9BX70 525 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 OSBPL10Q9BXB5 764 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 ANKRA2Q9H9E1 313 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 VNN3Q9NY84 501 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 IFT80Q9P2H3 777 aaPredicted RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 TRPC4Q9UBN4 977 aa14.25□□□□□ -0.13
ACTB-204ENST00000425660 C19orf53Q9UNZ5 99 aaPredicted RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 MAGED1Q9Y5V3 778 aaPredicted RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 GPC6Q9Y625 555 aaPredicted RBP14.25□□□□□ -0.13
ACTB-204ENST00000425660 PRAMEF25A6NGN4 478 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 DUXAA6NLW8 204 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 ARHGAP33O14559 1287 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 OR2B3O76000 313 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 ANKRD34CP0C6C1 535 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 SP9P0CG40 484 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 ETS2P15036 469 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 CD247P20963 164 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 AVPR1BP47901 424 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 ARL4DP49703 201 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 SEPHS1P49903 392 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 MAPK10P53779 464 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 ID2Q02363 134 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 MGAT2Q10469 447 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 MERTKQ12866 999 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 SLC36A3Q495N2 470 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 TRIM61Q5EBN2 209 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 UGT2A3Q6UWM9 527 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 BBS10Q8TAM1 723 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 SPPL2AQ8TCT8 520 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 NAT6Q93015 286 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 ZNF607Q96SK3 696 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 RBM4BQ9BQ04 359 aaKnown RBP14.24□□□□□ -0.13
ACTB-204ENST00000425660 ADI1Q9BV57 179 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 RBM4Q9BWF3 364 aaKnown RBP14.24□□□□□ -0.13
ACTB-204ENST00000425660 RSPO3Q9BXY4 272 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms