RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 AGFG1P52594 562 aaKnown RBP11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 FBXW4P57775 412 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SNTA1Q13424 505 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CUL3Q13618 768 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 EBPQ15125 230 aaKnown RBP11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 FBXO48Q5FWF7 155 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 WIPI1Q5MNZ9 446 aaPredicted RBP11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 C18orf63Q68DL7 685 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TIGD3Q6B0B8 471 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TTC19Q6DKK2 380 aaPredicted RBP11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 OR2A2Q6IF42 318 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 KLC3Q6P597 504 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 LYPD8Q6UX82 237 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 C3orf62Q6ZUJ4 267 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SEM1Q6ZVN7 128 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CYS1Q717R9 158 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 LUZP2Q86TE4 346 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 LRRC75A-AS1Q8N1F1 130 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TEX9Q8N6V9 391 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 NAXEQ8NCW5 288 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SIMC1Q8NDZ2 872 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 C17orf47Q8NEP4 570 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 WFDC11Q8NEX6 87 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 HUS1BQ8NHY5 278 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 WNT2BQ93097 391 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TMCO6Q96DC7 493 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 WDYHV1Q96HA8 205 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 MTERF1Q99551 399 aaKnown RBP11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SERPINI1Q99574 410 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PIP5K1AQ99755 562 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SLC39A3Q9BRY0 314 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 UGT2B28Q9BY64 529 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SETD2Q9BYW2 2564 aaPredicted RBP11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 OR10A5Q9H207 317 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ALG9Q9H6U8 611 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PLEKHF2Q9H8W4 249 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CAB39LQ9H9S4 337 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 FANCFQ9NPI8 374 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 NMRK1Q9NWW6 199 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 KLRF1Q9NZS2 232 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 BCAP29Q9UHQ4 241 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TSC22D4Q9Y3Q8 395 aa11.22□□□□□ -0.61
HLA-DQB3-203ENST00000425319 HCFC1P51610 2035 aa11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 EIF3HO15372 352 aaKnown RBP eCLIP11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 RCBTB2O95199 551 aa11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 LTA4HP09960 611 aaKnown RBP11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 RHOXF2BP0C7M4 288 aa11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 GFAPP14136 432 aa11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PORP16435 677 aaPredicted RBP11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CD22P20273 847 aa11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 IVDP26440 423 aa11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 XKP51811 444 aa11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 EEFSECP57772 596 aaKnown RBP11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SRYQ05066 204 aa11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 FAM83EQ2M2I3 478 aa11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ADNP2Q6IQ32 1131 aa11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ADGRD1Q6QNK2 874 aa11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ANGPTL8Q6UXH0 198 aa11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 Q71RC1 249 aaPredicted RBP11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 GPR22Q99680 433 aa11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 RBBP8Q99708 897 aa11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 DDX31Q9H8H2 851 aaKnown RBP11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PROK2Q9HC23 129 aa11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 RNF14Q9UBS8 474 aa11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ACOT9Q9Y305 439 aa11.21□□□□□ -0.61
HLA-DQB3-203ENST00000425319 INTS1Q8N201 2190 aaKnown RBP11.21□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PHF3Q92576 2039 aaKnown RBP11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 GLOD5A6NK44 160 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 FOXE1O00358 373 aaPredicted RBP11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PLPP1O14494 284 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 KERAO60938 352 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 BCAS2O75934 225 aaPredicted RBP11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SEC31AO94979 1220 aaKnown RBP11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 LRATO95237 230 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CD53P19397 219 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 KCNJ5P48544 419 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PSPHP78330 225 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 MRPS22P82650 360 aaKnown RBP11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 E2F2Q14209 437 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 POU4F3Q15319 338 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 OR4D1Q15615 310 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CPSF6Q16630 551 aaKnown RBP eCLIP11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 C10orf62Q5T681 223 aaPredicted RBP11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PRSS57Q6UWY2 283 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 YRDCQ86U90 279 aaKnown RBP11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 GRAMD2AQ8IUY3 354 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ZNF441Q8N8Z8 693 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 FAM83FQ8NEG4 500 aaPredicted RBP11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 INTS12Q96CB8 462 aaKnown RBP11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 UBXN10Q96LJ8 280 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 FAM111AQ96PZ2 611 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 OSBPL11Q9BXB4 747 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CXorf21Q9HAI6 301 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 JKAMPQ9P055 326 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 STOML1Q9UBI4 398 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PRODH2Q9UF12 536 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 EXO1Q9UQ84 846 aaKnown RBP11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ZNF780BQ9Y6R6 833 aa11.2□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PRRC2AP48634 2157 aaKnown RBP11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 A0A087X1B8 175 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms