RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 TTC21BQ7Z4L5 1316 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 ZNF861PO60384 105 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 GFPT2O94808 682 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 TSPY4P0CV99 314 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 TSPY10P0CW01 314 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 EZRP15311 586 aaKnown RBP2.8□□□□□ -1.96
LINC01040-201ENST00000425048 ERCC2P18074 760 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 PPP2R1BP30154 601 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 COPB2P35606 906 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 TCF7P36402 384 aaPredicted RBP2.8□□□□□ -1.96
LINC01040-201ENST00000425048 PLOD1Q02809 727 aaPredicted RBP2.8□□□□□ -1.96
LINC01040-201ENST00000425048 SNCBQ16143 134 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 TAZQ16635 292 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 CCDC40Q4G0X9 1142 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 CCDC92Q53HC0 331 aaPredicted RBP2.8□□□□□ -1.96
LINC01040-201ENST00000425048 NCCRP1Q6ZVX7 275 aaPredicted RBP2.8□□□□□ -1.96
LINC01040-201ENST00000425048 CCDC50Q8IVM0 306 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 GPR137CQ8N3F9 429 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 SLC35C1Q96A29 364 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 CCDC47Q96A33 483 aaKnown RBP2.8□□□□□ -1.96
LINC01040-201ENST00000425048 AK8Q96MA6 479 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 TECTBQ96PL2 329 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 ZNF184Q99676 751 aaPredicted RBP2.8□□□□□ -1.96
LINC01040-201ENST00000425048 CENPOQ9BU64 300 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 NUP58Q9BVL2 599 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 CARD6Q9BX69 1037 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 SLC7A5P2Q9GIP4 190 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 FZD8Q9H461 694 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 WDR35Q9P2L0 1181 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 ATXN10Q9UBB4 475 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 RAB26Q9ULW5 256 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 C15orf41Q9Y2V0 281 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 TMED5Q9Y3A6 229 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 TTLL3Q9Y4R7 772 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 KLK4Q9Y5K2 254 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 BZW2Q9Y6E2 419 aaKnown RBP2.8□□□□□ -1.96
LINC01040-201ENST00000425048 MYH8P13535 1937 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 MYH2Q9UKX2 1941 aa2.8□□□□□ -1.96
LINC01040-201ENST00000425048 CASZ1Q86V15 1759 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 KNDC1Q76NI1 1749 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 ARHGEF5Q12774 1597 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 IFT140Q96RY7 1462 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 NRXN1Q9ULB1 1477 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 CCDC69A6NI79 296 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 GOLGA6L10A6NI86 522 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 P2RX6O15547 441 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 PRAMEF12O95522 483 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 RPSAP08865 295 aaKnown RBP2.79□□□□□ -1.96
LINC01040-201ENST00000425048 KRT3P12035 628 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 P4HA1P13674 534 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 HSD17B1P14061 328 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 IDO1P14902 403 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 DESP17661 470 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 BDNFP23560 247 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 PSMA3P25788 255 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 P2RY4P51582 365 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 LINC00315P59091 139 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 UBE2HP62256 183 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 TEFQ10587 303 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 CBX3Q13185 183 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 DYNC1I2Q13409 638 aaKnown RBP2.79□□□□□ -1.96
LINC01040-201ENST00000425048 SLMAPQ14BN4 828 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 CCDC57Q2TAC2 916 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 C14orf28Q4W4Y0 310 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 TFDP3Q5H9I0 405 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 C6orf89Q6UWU4 347 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 GCNT7Q6ZNI0 430 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 CCDC73Q6ZRK6 1079 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 RBPMS2Q6ZRY4 209 aaKnown RBP2.79□□□□□ -1.96
LINC01040-201ENST00000425048 RBM43Q6ZSC3 357 aaKnown RBP2.79□□□□□ -1.96
LINC01040-201ENST00000425048 Q7L0L9 218 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 LCA5Q86VQ0 697 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 ARL14Q8N4G2 192 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 OR13C5Q8NGS8 318 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 SIPA1Q96FS4 1042 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 CASD1Q96PB1 797 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 TSC22D3Q99576 134 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 UPF3BQ9BZI7 483 aaKnown RBP2.79□□□□□ -1.96
LINC01040-201ENST00000425048 CCDC68Q9H2F9 335 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 IKZF5Q9H5V7 419 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 INIPQ9NRY2 104 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 UBAP1Q9NZ09 502 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 KLRF1Q9NZS2 232 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 MORF4L1Q9UBU8 362 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 GGA2Q9UJY4 613 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 TMCO1Q9UM00 188 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 KIF20BQ96Q89 1820 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 PBRM1Q86U86 1689 aa2.79□□□□□ -1.96
LINC01040-201ENST00000425048 ABCC3O15438 1527 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 FANCAO15360 1455 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 PLA2R1Q13018 1463 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 IQSEC2Q5JU85 1478 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 CCDC141Q6ZP82 1450 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 NPHP4O75161 1426 aaPredicted RBP2.78□□□□□ -1.96
LINC01040-201ENST00000425048 PIK3C2GO75747 1445 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 CPSF1Q10570 1443 aaKnown RBP2.78□□□□□ -1.96
LINC01040-201ENST00000425048 NPATQ14207 1427 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 NSD2O96028 1365 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 UBN2Q6ZU65 1347 aa2.78□□□□□ -1.96
LINC01040-201ENST00000425048 SPRR5A0A1B0GTR4 108 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms