RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 IMP3Q9NV31 184 aaKnown RBP10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 MBD1Q9UIS9 605 aaPredicted RBP10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 PCDHB11Q9Y5F2 797 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 C5orf42Q9H799 3197 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 A0A1W2PPK0 400 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 FAM170BA6NMN3 283 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 YKT6O15498 198 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 IGHA2P01877 340 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 MMP3P08254 477 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 AMD1P17707 334 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 LHX1P48742 406 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 COX10Q12887 443 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 GPR17Q13304 367 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 ELOAQ14241 798 aaKnown RBP10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 ZNF791Q3KP31 576 aaPredicted RBP10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 CLEC12AQ5QGZ9 265 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 SFRP4Q6FHJ7 346 aaPredicted RBP10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 TMEM88Q6PEY1 159 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 PLEKHH3Q7Z736 793 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 DDX53Q86TM3 631 aaKnown RBP10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 SERPINA9Q86WD7 417 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 IZUMO1Q8IYV9 350 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 ADGRF3Q8IZF5 1079 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 CLDN22Q8N7P3 220 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 C11orf65Q8NCR3 313 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 C11orf24Q96F05 449 aaPredicted RBP10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 TRIB3Q96RU7 358 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 KCNJ15Q99712 375 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 NTMT1Q9BV86 223 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 HPF1Q9NWY4 346 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 CNOT2Q9NZN8 540 aaKnown RBP10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 ACSL5Q9ULC5 683 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 LHX6Q9UPM6 363 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 MGAT4BQ9UQ53 548 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 CACNG2Q9Y698 323 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 GNG14A0A1W2PPG7 69 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 TRBC2A0A5B9 178 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 OR2W5A6NFC9 320 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 SLC30A4O14863 429 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 SEMA7AO75326 666 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 OR5F1O95221 314 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 ETHE1O95571 254 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 DHFRP00374 187 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 EBLN1P0CF75 366 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 HOXA1P49639 335 aaPredicted RBP10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 OR10A3P58181 314 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 RPS24P62847 133 aaKnown RBP10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 HBA1P69905 142 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 HSF2Q03933 536 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 MAP4K2Q12851 820 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 MLLT11Q13015 90 aaPredicted RBP10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 SCARB2Q14108 478 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 NCF4Q15080 339 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 SPOUT1Q5T280 376 aaKnown RBP10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 GDPGP1Q6ZNW5 385 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 SYT9Q86SS6 491 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 SAMD12Q8N8I0 201 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 MOSPD2Q8NHP6 518 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 ASZ1Q8WWH4 475 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 ABHD1Q96SE0 405 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 CINPQ9BW66 212 aaPredicted RBP10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 GPR63Q9BZJ6 419 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 GHITMQ9H3K2 345 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 ZFR2Q9UPR6 939 aaKnown RBP10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 PCDHGB7Q9Y5F8 929 aa10.71□□□□□ -0.7
SEC61A1-202ENST00000424880 WASH4PA8MWX3 477 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 ANKRD66B4E2M5 251 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 GPR171O14626 319 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 MMP20O60882 483 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 CTSHP09668 335 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 RHOQP17081 205 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 MAOBP27338 520 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 BTCP35070 178 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 SOAT1P35610 550 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 XKP51811 444 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 FLI1Q01543 452 aaPredicted RBP10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 HEPACAMQ14CZ8 416 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 TAF1AQ15573 450 aaPredicted RBP10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 ETFDHQ16134 617 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 TMEM107Q6UX40 140 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 NLRC3Q7RTR2 1065 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 PRSS45Q7RTY3 260 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 TEX26Q8N6G2 289 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 CREB3L1Q96BA8 519 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 NPAS1Q99742 590 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 P2RY13Q9BPV8 354 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 PRR14Q9BWN1 585 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 ASB8Q9H765 288 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 CFAP97Q9P2B7 532 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 TMEM5Q9Y2B1 443 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 RNF215Q9Y6U7 377 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 LGI1O95970 557 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 EIF4EP06730 217 aaKnown RBP10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 CSNK1DP48730 415 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 PPP3R1P63098 170 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 MLLT1Q03111 559 aaPredicted RBP10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 CCL14Q16627 93 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 ACSM5Q6NUN0 579 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 DBX2Q6ZNG2 339 aa10.7□□□□□ -0.7
SEC61A1-202ENST00000424880 C16orf59Q7L2K0 433 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms