RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 WWP2O00308 870 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 SYT5O00445 386 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 CASC3O15234 703 aaKnown RBP14.4□□□□□ -0.1
C9orf3-204ENST00000424143 ORC5O43913 435 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 ZNF780AO75290 641 aaPredicted RBP14.4□□□□□ -0.1
C9orf3-204ENST00000424143 ERGP11308 486 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 AZGP1P25311 298 aaKnown RBP14.4□□□□□ -0.1
C9orf3-204ENST00000424143 GABRR2P28476 465 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 OPRD1P41143 372 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 ARFIP1P53367 373 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 MANFP55145 182 aaKnown RBP14.4□□□□□ -0.1
C9orf3-204ENST00000424143 CASP9P55211 416 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 BDH1Q02338 343 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 ARHGAP19Q14CB8 494 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 TCTN1Q2MV58 587 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 ZNF805Q5CZA5 627 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 TRIQKQ629K1 86 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 TRILQ7L0X0 811 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 ARIH2OSQ8N7S6 290 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 GNPDA2Q8TDQ7 276 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 LRR1Q96L50 414 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 PRRC1Q96M27 445 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 FYTTD1Q96QD9 318 aaKnown RBP14.4□□□□□ -0.1
C9orf3-204ENST00000424143 RSPO3Q9BXY4 272 aaPredicted RBP14.4□□□□□ -0.1
C9orf3-204ENST00000424143 ZNF717Q9BY31 904 aaPredicted RBP14.4□□□□□ -0.1
C9orf3-204ENST00000424143 GIMAP4Q9NUV9 329 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 PTTG3PQ9NZH4 202 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 SEC14L3Q9UDX4 400 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 ITM2BQ9Y287 266 aa14.4□□□□□ -0.1
C9orf3-204ENST00000424143 ANKDD1BA6NHY2 528 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 A6NL46 340 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 FAM227AF5H4B4 570 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 TFECO14948 347 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-204ENST00000424143 CHST10O43529 356 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 SH3BGRLO75368 114 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 SOX14O95416 240 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 ALDH1A1P00352 501 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 SOD1P00441 154 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 HLA-DPB1P04440 258 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 IGFBP1P08833 259 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-204ENST00000424143 CLEC2LP0C7M8 214 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 SLC2A2P11168 524 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-204ENST00000424143 MMP11P24347 488 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 ACADLP28330 430 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 PDHA2P29803 388 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 BSGP35613 385 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 MMP12P39900 470 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 P2RX3P56373 397 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 ANGPT1Q15389 498 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 SNAP47Q5SQN1 464 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 KHDRBS2Q5VWX1 349 aaKnown RBP14.39□□□□□ -0.11
C9orf3-204ENST00000424143 ASTLQ6HA08 431 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-204ENST00000424143 LIPIQ6XZB0 460 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 TMEM64Q6YI46 380 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 Q6ZVU0 165 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 YIPF7Q8N8F6 280 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 POGLUT1Q8NBL1 392 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 OR4K5Q8NGD3 323 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 OR4D11Q8NGI4 311 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 OR52N1Q8NH53 320 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 RFKQ969G6 155 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 CREB3L1Q96BA8 519 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 FNDC11Q9BVV2 318 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 MS4A8Q9BY19 250 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 PCBD2Q9H0N5 130 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 PRKAG2Q9UGJ0 569 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 FBXW2Q9UKT8 454 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 GPR34Q9UPC5 381 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 SH2B3Q9UQQ2 575 aa14.39□□□□□ -0.11
C9orf3-204ENST00000424143 EXOGQ9Y2C4 368 aaKnown RBP14.39□□□□□ -0.11
C9orf3-204ENST00000424143 OR6C70A6NIJ9 312 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 ANHXE9PGG2 379 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 DRD2P14416 443 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 HK1P19367 917 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 TNNI3P19429 210 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 M6PRP20645 277 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 PPP2R1BP30154 601 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 FEN1P39748 380 aaKnown RBP14.38□□□□□ -0.11
C9orf3-204ENST00000424143 MAPK12P53778 367 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 RPS25P62851 125 aaKnown RBP14.38□□□□□ -0.11
C9orf3-204ENST00000424143 RPA4Q13156 261 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 TATDN3Q17R31 274 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 CRTC2Q53ET0 693 aaPredicted RBP14.38□□□□□ -0.11
C9orf3-204ENST00000424143 RPS26P11Q5JNZ5 115 aaPredicted RBP14.38□□□□□ -0.11
C9orf3-204ENST00000424143 PRAMEF14Q5SWL7 426 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 PRAMEF13Q5VWM6 474 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 BICRALQ6AI39 1079 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 ACSM5Q6NUN0 579 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 PAQR6Q6TCH4 344 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 ZNF782Q6ZMW2 699 aaPredicted RBP14.38□□□□□ -0.11
C9orf3-204ENST00000424143 RASSF6Q6ZTQ3 369 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 WDR53Q7Z5U6 358 aaPredicted RBP14.38□□□□□ -0.11
C9orf3-204ENST00000424143 ADIPOR2Q86V24 386 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 ADGRF3Q8IZF5 1079 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 LILRA3Q8N6C8 439 aaPredicted RBP14.38□□□□□ -0.11
C9orf3-204ENST00000424143 SFXN5Q8TD22 340 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 TM9SF4Q92544 642 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 KCTD12Q96CX2 325 aaKnown RBP14.38□□□□□ -0.11
C9orf3-204ENST00000424143 C1GALT1C1Q96EU7 318 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 RNFT2Q96EX2 444 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms