RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 OR1J4Q8NGS1 313 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 UBE2E3Q969T4 207 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 ADIPOR1Q96A54 375 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 CTHRC1Q96CG8 243 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 PIK3IP1Q96FE7 263 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 CMTM7Q96FZ5 175 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 MARK4Q96L34 752 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 G6PC3Q9BUM1 346 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 DERL2Q9GZP9 239 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 POPDC3Q9HBV1 291 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 CLCF1Q9UBD9 225 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 PHF11Q9UIL8 331 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 PSAT1Q9Y617 370 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 FAM95CA0A1B0GW59 222 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 WASHC1A8K0Z3 465 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 GNB5O14775 395 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 OR10H2O60403 315 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 SLC35E2BP0CK96 405 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 SLC35E2P0CK97 266 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 SERPINB1P30740 379 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 GCKP35557 465 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 ARFIP1P53367 373 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 NRG3P56975 720 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 KRTAP1-1Q07627 177 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 FRG1Q14331 258 aaKnown RBP15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 CAPRIN1Q14444 709 aaKnown RBP15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 SETDB1Q15047 1291 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 FBXO48Q5FWF7 155 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 ENPP6Q6UWR7 440 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 GCNT2Q8N0V5 402 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 SNX31Q8N9S9 440 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 C17orf47Q8NEP4 570 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 UCN3Q969E3 161 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 SORBS1Q9BX66 1292 aaKnown RBP15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 KLHL28Q9NXS3 571 aa15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 PTBP2Q9UKA9 531 aaKnown RBP15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 RAI1Q7Z5J4 1906 aaPredicted RBP15.2■□□□□ 0.02
CHCHD3-202ENST00000423635 RNF212BA8MTL3 300 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 H0Y3Z8 333 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 SAP18O00422 153 aaKnown RBP15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 DNALI1O14645 258 aaPredicted RBP15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 SH3BGRLO75368 114 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 PRKRAO75569 313 aaKnown RBP15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 WISP3O95389 354 aaPredicted RBP15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 ABCB1P08183 1280 aaPredicted RBP15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 RHOXF2BP0C7M4 288 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 NAGAP17050 411 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 LOXP28300 417 aaPredicted RBP15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 SSTR4P31391 388 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 BUD31P41223 144 aaPredicted RBP15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 HNRNPH2P55795 449 aaKnown RBP15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 FUT7Q11130 342 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 HLA-DQA1Q5Y7H0 255 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 STEAP4Q687X5 459 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 SLC30A6Q6NXT4 461 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 MED27Q6P2C8 311 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 PLXDC2Q6UX71 529 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 GPSM1Q86YR5 675 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 TRIM42Q8IWZ5 723 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 PHC2Q8IXK0 858 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 ZNF615Q8N8J6 731 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 OR7G3Q8NG95 312 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 GRK7Q8WTQ7 553 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 RGMAQ96B86 450 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 OR51B5Q9H339 312 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 CXorf21Q9HAI6 301 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 LZTFL1Q9NQ48 299 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 EXO1Q9UQ84 846 aaKnown RBP15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 NBEAL1Q6ZS30 2694 aa15.19■□□□□ 0.02
CHCHD3-202ENST00000423635 A0A1W2PNV4 684 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 SNPHO15079 494 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 CBR3O75828 277 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 CRHP06850 196 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 ABCD3P28288 659 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 CPOXP36551 454 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 CD79BP40259 229 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 ELK3P41970 407 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 GFRA1P56159 465 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 SRYQ05066 204 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 SNTA1Q13424 505 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 MRM1Q6IN84 353 aaKnown RBP15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 HEPHL1Q6MZM0 1159 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 ANGPTL8Q6UXH0 198 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 PDPRQ8NCN5 879 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 STARD4Q96DR4 205 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 MS4A14Q96JA4 679 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 HS3ST6Q96QI5 342 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 MCMBPQ9BTE3 642 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 OR2B2Q9GZK3 357 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 RBSNQ9H1K0 784 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 ZNF701Q9NV72 531 aaPredicted RBP15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 ELOVL5Q9NYP7 299 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 ADGRE2Q9UHX3 823 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 ASB4Q9Y574 426 aa15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 SONP18583 2426 aaKnown RBP15.18■□□□□ 0.02
CHCHD3-202ENST00000423635 A0A1W2PR48 441 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 PLPP1O14494 284 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 HCRTR2O43614 444 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 TMCC2O75069 709 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 ICOSLGO75144 302 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms