RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 NDUFAF5Q5TEU4 345 aa14□□□□□ -0.17
USB1-202ENST00000423271 PRAMEF20Q5VT98 475 aa14□□□□□ -0.17
USB1-202ENST00000423271 SLC29A4Q7RTT9 530 aa14□□□□□ -0.17
USB1-202ENST00000423271 COMMD6Q7Z4G1 85 aa14□□□□□ -0.17
USB1-202ENST00000423271 SLC22A16Q86VW1 577 aa14□□□□□ -0.17
USB1-202ENST00000423271 C10orf107Q8IVU9 208 aa14□□□□□ -0.17
USB1-202ENST00000423271 MMP21Q8N119 569 aa14□□□□□ -0.17
USB1-202ENST00000423271 METTL4Q8N3J2 472 aa14□□□□□ -0.17
USB1-202ENST00000423271 CCNYL1Q8N7R7 359 aa14□□□□□ -0.17
USB1-202ENST00000423271 TRPC4APQ8TEL6 797 aa14□□□□□ -0.17
USB1-202ENST00000423271 SDCCAG3Q96C92 435 aa14□□□□□ -0.17
USB1-202ENST00000423271 SPACA9Q96E40 222 aaPredicted RBP14□□□□□ -0.17
USB1-202ENST00000423271 CXorf21Q9HAI6 301 aa14□□□□□ -0.17
USB1-202ENST00000423271 IL1RL2Q9HB29 575 aa14□□□□□ -0.17
USB1-202ENST00000423271 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14□□□□□ -0.17
USB1-202ENST00000423271 OXSMQ9NWU1 459 aa14□□□□□ -0.17
USB1-202ENST00000423271 TNFRSF10DQ9UBN6 386 aa14□□□□□ -0.17
USB1-202ENST00000423271 MID2Q9UJV3 735 aa14□□□□□ -0.17
USB1-202ENST00000423271 SLC12A4Q9UP95 1085 aa14□□□□□ -0.17
USB1-202ENST00000423271 NCKAP5O14513 1909 aa14□□□□□ -0.17
USB1-202ENST00000423271 NINQ8N4C6 2090 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 NPIPA2E9PIF3 369 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 NPIPA3F8WFD2 350 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 OR4F21O95013 312 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 FBXO45P0C2W1 286 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 MYZAPP0CAP1 466 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 PIK3R1P27986 724 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 GALNSP34059 522 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 KIR3DL1P43629 444 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 GALNT1Q10472 559 aaPredicted RBP13.99□□□□□ -0.17
USB1-202ENST00000423271 CCNYL2Q5T2Q4 361 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 C10orf62Q5T681 223 aaPredicted RBP13.99□□□□□ -0.17
USB1-202ENST00000423271 TMEM64Q6YI46 380 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 RGS9BPQ6ZS82 235 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 PAGE2Q7Z2X7 111 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 GALNT12Q8IXK2 581 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 EID3Q8N140 333 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 FAM109AQ8N4B1 249 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 SLC15A4Q8N697 577 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 ZNF441Q8N8Z8 693 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 FAM13CQ8NE31 585 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 OR10G3Q8NGC4 313 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 PAQR8Q8TEZ7 354 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 SELENOMQ8WWX9 145 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 TP63Q9H3D4 680 aaPredicted RBP13.99□□□□□ -0.17
USB1-202ENST00000423271 GSTO2Q9H4Y5 243 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 PROK2Q9HC23 129 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 TMBIM4Q9HC24 238 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 AHSPQ9NZD4 102 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 TRPS1Q9UHF7 1281 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 ADAM29Q9UKF5 820 aa13.99□□□□□ -0.17
USB1-202ENST00000423271 CHCHD2Q9Y6H1 151 aaPredicted RBP13.99□□□□□ -0.17
USB1-202ENST00000423271 ATP6AP2A0A1C7CYW4 349 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 LRRC3CA6NJW4 275 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 OR6C76A6NM76 312 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 ATP6AP2O75787 350 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 IGHG3P01860 377 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 ALDH3A1P30838 453 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 XKP51811 444 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 MAPK12P53778 367 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 NAGLUP54802 743 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 DNAJB13P59910 316 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 TBL3Q12788 808 aaKnown RBP13.98□□□□□ -0.17
USB1-202ENST00000423271 HYAL4Q2M3T9 481 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 SLC22A10Q63ZE4 541 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 PAOXQ6QHF9 649 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 TRILQ7L0X0 811 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 FBXW8Q8N3Y1 598 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 CDYL2Q8N8U2 506 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 OR4K14Q8NGD5 310 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 OR5M9Q8NGP3 310 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 OR5M3Q8NGP4 307 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 ZNF382Q96SR6 550 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 MECRQ9BV79 373 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 TRIM8Q9BZR9 551 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 SSU72Q9NP77 194 aaKnown RBP13.98□□□□□ -0.17
USB1-202ENST00000423271 PNPLA3Q9NST1 481 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 SNX6Q9UNH7 406 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 PCDHA9Q9Y5H5 950 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 ACTL7BQ9Y614 415 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.98□□□□□ -0.17
USB1-202ENST00000423271 POLQO75417 2590 aa13.98□□□□□ -0.17
USB1-202ENST00000423271 PHF3Q92576 2039 aaKnown RBP13.98□□□□□ -0.17
USB1-202ENST00000423271 EXPH5Q8NEV8 1989 aa13.97□□□□□ -0.17
USB1-202ENST00000423271 GOLGA6L10A6NI86 522 aa13.97□□□□□ -0.17
USB1-202ENST00000423271 MANBAO00462 879 aa13.97□□□□□ -0.17
USB1-202ENST00000423271 RFPL3SP0C7P2 107 aa13.97□□□□□ -0.17
USB1-202ENST00000423271 CPMP14384 443 aa13.97□□□□□ -0.17
USB1-202ENST00000423271 CHN1P15882 459 aa13.97□□□□□ -0.17
USB1-202ENST00000423271 NT5EP21589 574 aa13.97□□□□□ -0.17
USB1-202ENST00000423271 PTGER4P35408 488 aa13.97□□□□□ -0.17
USB1-202ENST00000423271 KCNJ2P63252 427 aa13.97□□□□□ -0.17
USB1-202ENST00000423271 FUT7Q11130 342 aa13.97□□□□□ -0.17
USB1-202ENST00000423271 LCP2Q13094 533 aa13.97□□□□□ -0.17
USB1-202ENST00000423271 GXYLT1Q4G148 440 aa13.97□□□□□ -0.17
USB1-202ENST00000423271 LIPMQ5VYY2 423 aa13.97□□□□□ -0.17
USB1-202ENST00000423271 SLC48A1Q6P1K1 146 aa13.97□□□□□ -0.17
USB1-202ENST00000423271 FRMD7Q6ZUT3 714 aa13.97□□□□□ -0.17
USB1-202ENST00000423271 GDF7Q7Z4P5 450 aa13.97□□□□□ -0.17
USB1-202ENST00000423271 C1orf52Q8N6N3 182 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms