RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 SCAMP4Q969E2 229 aa15.79■□□□□ 0.12
NPC1L1-203ENST00000423141 MARVELD3Q96A59 401 aa15.79■□□□□ 0.12
NPC1L1-203ENST00000423141 CXorf40BQ96DE9 158 aa15.79■□□□□ 0.12
NPC1L1-203ENST00000423141 METTL2AQ96IZ6 378 aaKnown RBP15.79■□□□□ 0.12
NPC1L1-203ENST00000423141 ZSCAN5AQ9BUG6 496 aa15.79■□□□□ 0.12
NPC1L1-203ENST00000423141 KLF16Q9BXK1 252 aaPredicted RBP15.79■□□□□ 0.12
NPC1L1-203ENST00000423141 PLA2G12AQ9BZM1 189 aa15.79■□□□□ 0.12
NPC1L1-203ENST00000423141 SLC6A16Q9GZN6 736 aa15.79■□□□□ 0.12
NPC1L1-203ENST00000423141 RNF32Q9H0A6 362 aa15.79■□□□□ 0.12
NPC1L1-203ENST00000423141 HEXA-AS1Q9H8Q6 139 aa15.79■□□□□ 0.12
NPC1L1-203ENST00000423141 MARCH5Q9NX47 278 aa15.79■□□□□ 0.12
NPC1L1-203ENST00000423141 ZNF222Q9UK12 451 aa15.79■□□□□ 0.12
NPC1L1-203ENST00000423141 NCKAP1Q9Y2A7 1128 aa15.79■□□□□ 0.12
NPC1L1-203ENST00000423141 TRAV6A0A075B6T7 132 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 SGTAO43765 313 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 NME6O75414 186 aaPredicted RBP15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 KLK1P06870 262 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 SYPP08247 313 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 LIMS3P0CW19 117 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 LIMS4P0CW20 117 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 ELK1P19419 428 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 MMP11P24347 488 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 PTGS2P35354 604 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 DGKGP49619 791 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 LSRQ86X29 649 aaPredicted RBP15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 MARCH9Q86YJ5 346 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 SLC9A6Q92581 669 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 FGF11Q92914 225 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 UCN3Q969E3 161 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 SLC22A12Q96S37 553 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 FBXW2Q9UKT8 454 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 AUP1Q9Y679 476 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 TMEM88BA6NKF7 163 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 C5orf58C9J3I9 102 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 SOCS5O75159 536 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 CELF2O95319 508 aaKnown RBP15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 ALDH1A1P00352 501 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 EPHX1P07099 455 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 SLC6A1P30531 599 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 FGF9P31371 208 aaPredicted RBP15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 GIPRP48546 466 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 PODNL1Q6PEZ8 512 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 OLIG3Q7RTU3 272 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 ZER1Q7Z7L7 766 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 GHDCQ8N2G8 530 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 ZNF655Q8N720 491 aaPredicted RBP15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 PLA2G15Q8NCC3 412 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 NEIL3Q8TAT5 605 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 SCRN2Q96FV2 425 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 ACAT2Q9BWD1 397 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 MED28Q9H204 178 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 CTPS2Q9NRF8 586 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 SLCO1C1Q9NYB5 712 aa15.78■□□□□ 0.12
NPC1L1-203ENST00000423141 LAMA2P24043 3122 aaKnown RBP15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 CD8B2A6NJW9 211 aa15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 IL3P08700 152 aa15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 CD8BP10966 210 aa15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 HMGA1P17096 107 aaKnown RBP15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 CXCL3P19876 107 aa15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 SERPINA4P29622 427 aa15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 RAB8AP61006 207 aa15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 TLE2Q04725 743 aa15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 FAM71E1Q6IPT2 247 aa15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 RETSATQ6NUM9 610 aa15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 CD200R1LQ6Q8B3 271 aa15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 METAP1DQ6UB28 335 aaPredicted RBP15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 FAM92BQ6ZTR7 304 aa15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 SLC24A5Q71RS6 500 aa15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 NACC2Q96BF6 587 aa15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 PDXPQ96GD0 296 aa15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 SPNS1Q9H2V7 528 aa15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 PIGUQ9H490 435 aa15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 EGLN3Q9H6Z9 239 aa15.77■□□□□ 0.12
NPC1L1-203ENST00000423141 TMEM129A0AVI4 362 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 M0R3H8 397 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 SSTR2P30874 369 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 SMAD3P84022 425 aaKnown RBP15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 TAGLNQ01995 201 aaKnown RBP15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 MFSD13AQ14CX5 517 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 FAAH2Q6GMR7 532 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 MED27Q6P2C8 311 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 IL20RBQ6UXL0 311 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 TMEM91Q6ZNR0 172 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 SLCO4C1Q6ZQN7 724 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 NR2C2APQ86WQ0 139 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 ARIH2OSQ8N7S6 290 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 C2orf69Q8N8R5 385 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 C19orf43Q9BQ61 176 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 ARHGAP9Q9BRR9 750 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 FUZQ9BT04 418 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 C2orf49Q9BVC5 232 aaPredicted RBP15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 B3GNT4Q9C0J1 378 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 CDCP1Q9H5V8 836 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 SLAMF7Q9NQ25 335 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 TAAR2Q9P1P5 351 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 EXTL2Q9UBQ6 330 aa15.77■□□□□ 0.11
NPC1L1-203ENST00000423141 TRDV1A0A1B0GX56 115 aa15.76■□□□□ 0.11
NPC1L1-203ENST00000423141 ANKDD1BA6NHY2 528 aa15.76■□□□□ 0.11
NPC1L1-203ENST00000423141 TRIM77I1YAP6 450 aa15.76■□□□□ 0.11
NPC1L1-203ENST00000423141 RAF1P04049 648 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms