RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 MRPS18AQ9NVS2 196 aaKnown RBP12.03□□□□□ -0.48
CTCFL-204ENST00000422869 SH2B3Q9UQQ2 575 aa12.03□□□□□ -0.48
CTCFL-204ENST00000422869 TRDV1A0A1B0GX56 115 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 BTN3A3O00478 584 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 LIMS3P0CW19 117 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 LIMS4P0CW20 117 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 ACP2P11117 423 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 CCND3P30281 292 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-204ENST00000422869 GIPRP48546 466 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 RAB40BQ12829 278 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 DUSP6Q16828 381 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 FAM26DQ5JW98 314 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 ZNF57Q68EA5 555 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-204ENST00000422869 FUT10Q6P4F1 479 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 SHFQ7M4L6 423 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 TMEM173Q86WV6 379 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-204ENST00000422869 HS6ST3Q8IZP7 471 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 DNAJC5GQ8N7S2 189 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 OR56A3Q8NH54 315 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 C2orf15Q8WU43 125 aaKnown RBP12.02□□□□□ -0.49
CTCFL-204ENST00000422869 RNFT2Q96EX2 444 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 TMEM19Q96HH6 336 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 GPA33Q99795 319 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 C1QTNF7Q9BXJ2 289 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 SLC6A16Q9GZN6 736 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 RNF32Q9H0A6 362 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 SEMA3GQ9NS98 782 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 NPC1O15118 1278 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 LANCL1O43813 399 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 IGSF6O95976 241 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 TGFB1P01137 390 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 ZNF250P15622 560 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 MMP11P24347 488 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 HOXD10P28358 340 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 SPINT3P49223 89 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 INPP1P49441 399 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 BTG1P62324 171 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 GPR176Q14439 515 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 UAP1L1Q3KQV9 507 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 PLA1AQ53H76 456 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 PXDC1Q5TGL8 231 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 TYW3Q6IPR3 259 aaKnown RBP12.02□□□□□ -0.49
CTCFL-204ENST00000422869 TNFAIP8L2Q6P589 184 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-204ENST00000422869 COMTD1Q86VU5 262 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 LILRA3Q8N6C8 439 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-204ENST00000422869 OR11H7Q8NGC8 314 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 OR11H4Q8NGC9 324 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 ZNF431Q8TF32 576 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-204ENST00000422869 TEFMQ96QE5 360 aaKnown RBP12.02□□□□□ -0.49
CTCFL-204ENST00000422869 SPNS1Q9H2V7 528 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 OR51B5Q9H339 312 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 TAAR2Q9P1P5 351 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 FBXW2Q9UKT8 454 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 MGAT4AQ9UM21 535 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 A4GNTQ9UNA3 340 aa12.02□□□□□ -0.49
CTCFL-204ENST00000422869 CIB4A0PJX0 185 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 OR2AG2A6NM03 316 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 NME6O75414 186 aaPredicted RBP12.01□□□□□ -0.49
CTCFL-204ENST00000422869 OR7A10O76100 309 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 PAHP00439 452 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 TFPIP10646 304 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 CDK5Q00535 292 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 TAGLNQ01995 201 aaKnown RBP12.01□□□□□ -0.49
CTCFL-204ENST00000422869 PIN1Q13526 163 aaPredicted RBP12.01□□□□□ -0.49
CTCFL-204ENST00000422869 DSG2Q14126 1118 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 PODNL1Q6PEZ8 512 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 ZER1Q7Z7L7 766 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.01□□□□□ -0.49
CTCFL-204ENST00000422869 PHF21AQ96BD5 680 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 ECHDC3Q96DC8 303 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 C17orf62Q9BQA9 187 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 LINC00597Q9H2U6 94 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 FOLH1BQ9HBA9 442 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 A4GALTQ9NPC4 353 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 DMRT3Q9NQL9 472 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 SLCO1C1Q9NYB5 712 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 COQ3Q9NZJ6 369 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 TRPM5Q9NZQ8 1165 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 CLEC4EQ9ULY5 219 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 NCKAP1Q9Y2A7 1128 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 PIPSLA2A3N6 862 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 GREM1O60565 184 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 ASGR1P07306 291 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 ELK1P19419 428 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 UQCRC2P22695 453 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 PREPP48147 710 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 GATMP50440 423 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 SMAD3P84022 425 aaKnown RBP12.01□□□□□ -0.49
CTCFL-204ENST00000422869 MFSD13AQ14CX5 517 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 CCDC85BQ15834 202 aaPredicted RBP12.01□□□□□ -0.49
CTCFL-204ENST00000422869 BCL2L15Q5TBC7 163 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 CD300LDQ6UXZ3 194 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 BMPERQ8N8U9 685 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 OR2AP1Q8NGE2 309 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 NEIL3Q8TAT5 605 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 ZNF354BQ96LW1 612 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 TMED9Q9BVK6 235 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 PLA2G12AQ9BZM1 189 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 NT5DC2Q9H857 520 aa12.01□□□□□ -0.49
CTCFL-204ENST00000422869 PPIL1Q9Y3C6 166 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms