RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 PRSS53Q2L4Q9 553 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 SMU1Q2TAY7 513 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 SPINK14Q6IE38 97 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 C9orf40Q8IXQ3 194 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 ARFGAP2Q8N6H7 521 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 CKAP2Q8WWK9 683 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 MAGEB18Q96M61 343 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 PRPF18Q99633 342 aaKnown RBP14.62□□□□□ -0.07
BRAT1-202ENST00000421712 WDR55Q9H6Y2 383 aaPredicted RBP14.62□□□□□ -0.07
BRAT1-202ENST00000421712 SLCO1B3Q9NPD5 702 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 MED4Q9NPJ6 270 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 TAS2R7Q9NYW3 318 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 MAT2BQ9NZL9 334 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 ERVK-11Q9UQG0 969 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 CPAMD8Q8IZJ3 1885 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 SPTA1P02549 2419 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 C2orf92A0A1B0GVN3 265 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 A8MVJ9 347 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 MYO1GB0I1T2 1018 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 SDHDO14521 159 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 PDPK1O15530 556 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 PRAMEF2O60811 474 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 DIAPH2O60879 1101 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 CD46P15529 392 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 EPHA3P29320 983 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 GPC1P35052 558 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 HLCSP50747 726 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 MANFP55145 182 aaKnown RBP14.61□□□□□ -0.07
BRAT1-202ENST00000421712 MLLT10P55197 1068 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 TRMT12Q53H54 448 aaKnown RBP14.61□□□□□ -0.07
BRAT1-202ENST00000421712 ZNF468Q5VIY5 522 aaPredicted RBP14.61□□□□□ -0.07
BRAT1-202ENST00000421712 IL20RBQ6UXL0 311 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 FAM47EQ6ZV65 393 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 OR7A2PQ8NGA2 310 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 OR52R1Q8NGF1 315 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 NUBPLQ8TB37 319 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 TMEM125Q96AQ2 219 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 CIDECQ96AQ7 238 aaPredicted RBP14.61□□□□□ -0.07
BRAT1-202ENST00000421712 MAGED4Q96JG8 741 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 C5orf34Q96MH7 638 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 C7orf26Q96N11 449 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 SIGLEC12Q96PQ1 595 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 GLIPR2Q9H4G4 154 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 KLHL1Q9NR64 748 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 HPF1Q9NWY4 346 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 CFL2Q9Y281 166 aa14.61□□□□□ -0.07
BRAT1-202ENST00000421712 TMEM200CA6NKL6 621 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 SCAMP2O15127 329 aaKnown RBP14.6□□□□□ -0.07
BRAT1-202ENST00000421712 BCAS2O75934 225 aaPredicted RBP14.6□□□□□ -0.07
BRAT1-202ENST00000421712 PRPS1L1P21108 318 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 NR0B1P51843 470 aaKnown RBP14.6□□□□□ -0.07
BRAT1-202ENST00000421712 DIO3P55073 304 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 MGAT2Q10469 447 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 HSPB3Q12988 150 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 RPS6KA2Q15349 733 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 MAPKAPK3Q16644 382 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 PGS1Q32NB8 556 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 ZNF385BQ569K4 471 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 ZNF628Q5EBL2 1059 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 ZNF766Q5HY98 468 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 CPTPQ5TA50 214 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 LARP4Q71RC2 724 aaKnown RBP eCLIP14.6□□□□□ -0.07
BRAT1-202ENST00000421712 SPATA19Q7Z5L4 167 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 CISD2Q8N5K1 135 aaKnown RBP14.6□□□□□ -0.07
BRAT1-202ENST00000421712 KRTCAP2Q8N6L1 136 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 ZNF615Q8N8J6 731 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 Q8NA96 180 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 C16orf52Q8NHV5 167 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 ZFP28Q8NHY6 868 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 SLC22A8Q8TCC7 542 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 ZNF675Q8TD23 568 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 MTERF3Q96E29 417 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 ZBED6CLQ96FA7 236 aaPredicted RBP14.6□□□□□ -0.07
BRAT1-202ENST00000421712 AMDHD1Q96NU7 426 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 RASL10BQ96S79 203 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 DPY30Q9C005 99 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 WWTR1Q9GZV5 400 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 EPN3Q9H201 632 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 ANKRA2Q9H9E1 313 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 ATAD3AQ9NVI7 634 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 PRODH2Q9UF12 536 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 ATP6V1HQ9UI12 483 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 USH1CQ9Y6N9 552 aa14.6□□□□□ -0.07
BRAT1-202ENST00000421712 TLN1Q9Y490 2541 aaKnown RBP14.6□□□□□ -0.07
BRAT1-202ENST00000421712 CDK2AP1O14519 115 aa14.59□□□□□ -0.07
BRAT1-202ENST00000421712 TBX19O60806 448 aa14.59□□□□□ -0.07
BRAT1-202ENST00000421712 CLPSP04118 112 aa14.59□□□□□ -0.07
BRAT1-202ENST00000421712 EFNA1P20827 205 aaPredicted RBP14.59□□□□□ -0.07
BRAT1-202ENST00000421712 S1PR1P21453 382 aa14.59□□□□□ -0.07
BRAT1-202ENST00000421712 TRHRP34981 398 aaPredicted RBP14.59□□□□□ -0.07
BRAT1-202ENST00000421712 SOX3P41225 446 aa14.59□□□□□ -0.07
BRAT1-202ENST00000421712 NME5P56597 212 aa14.59□□□□□ -0.07
BRAT1-202ENST00000421712 CLDN8P56748 225 aa14.59□□□□□ -0.07
BRAT1-202ENST00000421712 EBPQ15125 230 aaKnown RBP14.59□□□□□ -0.07
BRAT1-202ENST00000421712 CEBPEQ15744 281 aa14.59□□□□□ -0.07
BRAT1-202ENST00000421712 MPEG1Q2M385 716 aa14.59□□□□□ -0.07
BRAT1-202ENST00000421712 SLC9B1Q4ZJI4 515 aa14.59□□□□□ -0.07
BRAT1-202ENST00000421712 PIGGQ5H8A4 983 aa14.59□□□□□ -0.07
BRAT1-202ENST00000421712 OPN5Q6U736 354 aa14.59□□□□□ -0.07
BRAT1-202ENST00000421712 TMEM107Q6UX40 140 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms