RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 SPDL1Q96EA4 605 aa16.34■□□□□ 0.21
LINC00271-201ENST00000421378 MMP25Q9NPA2 562 aa16.34■□□□□ 0.21
LINC00271-201ENST00000421378 PCDHGB4Q9UN71 923 aa16.34■□□□□ 0.21
LINC00271-201ENST00000421378 KCNMB2Q9Y691 235 aa16.34■□□□□ 0.21
LINC00271-201ENST00000421378 PTPRQQ9UMZ3 2332 aa16.33■□□□□ 0.21
LINC00271-201ENST00000421378 DYTNA2CJ06 578 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 PLOD3O60568 738 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 DCTN3O75935 186 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 ABCB1P08183 1280 aaPredicted RBP16.33■□□□□ 0.2
LINC00271-201ENST00000421378 CELA2AP08217 269 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 CAPN3P20807 821 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 SSTR4P31391 388 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 SOX18P35713 384 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 CDK9P50750 372 aaKnown RBP16.33■□□□□ 0.2
LINC00271-201ENST00000421378 CLCN2P51788 898 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 HBA1P69905 142 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 Q0VFX4 171 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 CHAF1BQ13112 559 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 KLF10Q13118 480 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 VPS26BQ4G0F5 336 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 TRMT12Q53H54 448 aaKnown RBP16.33■□□□□ 0.2
LINC00271-201ENST00000421378 MSANTD1Q6ZTZ1 278 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 KBTBD2Q8IY47 623 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 ZNF321PQ8N8H1 164 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 OR7G2Q8NG99 324 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 ELP4Q96EB1 424 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 CCDC115Q96NT0 180 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 SEMA4CQ9C0C4 833 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 RMND5AQ9H871 391 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 DDX18Q9NVP1 670 aaKnown RBP16.33■□□□□ 0.2
LINC00271-201ENST00000421378 TAS2R9Q9NYW1 312 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 PTGFRNQ9P2B2 879 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 ZNF639Q9UID6 485 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 SNX8Q9Y5X2 465 aa16.33■□□□□ 0.2
LINC00271-201ENST00000421378 A0A087WV62 115 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 TRBV11-1A0A0K0K1C0 115 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 PLOD2O00469 737 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 SERPINA7P05543 415 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 CD1EP15812 388 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 S1PR1P21453 382 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 ITGA3P26006 1051 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 MAPKAPK3Q16644 382 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 RNF111Q6ZNA4 994 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 KIF2BQ8N4N8 673 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 OR7G1Q8NGA0 311 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 OR4A15Q8NGL6 344 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 PSMA8Q8TAA3 256 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 ELP5Q8TE02 316 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 LRRC37BQ96QE4 947 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 PANX1Q96RD7 426 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 NUDT9Q9BW91 350 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 MYLK2Q9H1R3 596 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 ANKRA2Q9H9E1 313 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 SIRT3Q9NTG7 399 aaPredicted RBP16.32■□□□□ 0.2
LINC00271-201ENST00000421378 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.32■□□□□ 0.2
LINC00271-201ENST00000421378 BTNL2Q9UIR0 455 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 MGAQ8IWI9 3026 aa16.32■□□□□ 0.2
LINC00271-201ENST00000421378 A0A1W2PP18 115 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 PRAMEF2O60811 474 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 CBX7O95931 251 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 SNRPB2P08579 225 aaKnown RBP16.31■□□□□ 0.2
LINC00271-201ENST00000421378 IFI6P09912 130 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 SLC37A1P57057 533 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 EXOSC7Q15024 291 aaKnown RBP16.31■□□□□ 0.2
LINC00271-201ENST00000421378 MAPRE2Q15555 327 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 IRAK1BP1Q5VVH5 260 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 HSDL2Q6YN16 418 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 SZRD1Q7Z422 152 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 APLFQ8IW19 511 aaPredicted RBP16.31■□□□□ 0.2
LINC00271-201ENST00000421378 OR2L13Q8N349 312 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 GALNT16Q8N428 558 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 OR52R1Q8NGF1 315 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 TSPEARQ8WU66 669 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 APOBEC4Q8WW27 367 aaKnown RBP16.31■□□□□ 0.2
LINC00271-201ENST00000421378 THOC3Q96J01 351 aaKnown RBP16.31■□□□□ 0.2
LINC00271-201ENST00000421378 MAGED4Q96JG8 741 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 CCDC106Q9BWC9 280 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 OR10A5Q9H207 317 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 CXorf36Q9H7Y0 433 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 SLC52A3Q9NQ40 469 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 BCAP29Q9UHQ4 241 aa16.31■□□□□ 0.2
LINC00271-201ENST00000421378 ZNF223Q9UK11 482 aaPredicted RBP16.31■□□□□ 0.2
LINC00271-201ENST00000421378 MAP1BP46821 2468 aaKnown RBP16.31■□□□□ 0.2
LINC00271-201ENST00000421378 UPK1AO00322 258 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 RFXANKO14593 260 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 ANGPT2O15123 496 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 BCAS2O75934 225 aaPredicted RBP16.3■□□□□ 0.2
LINC00271-201ENST00000421378 DNAJB5O75953 348 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 CPSF4O95639 269 aaKnown RBP16.3■□□□□ 0.2
LINC00271-201ENST00000421378 CLPSP04118 112 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 ITGAMP11215 1152 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 SOAT1P35610 550 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 PRR5P85299 388 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 C6orf10Q5SRN2 563 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 FHL5Q5TD97 284 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 BORAQ6PGQ7 559 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 SIMC1Q8NDZ2 872 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 ITCHQ96J02 903 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 SLC25A23Q9BV35 468 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 LHPPQ9H008 270 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms