RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ANGPTL3Q9Y5C1 460 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 CPAMD8Q8IZJ3 1885 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 SHANK1Q9Y566 2161 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 USP9XQ93008 2570 aaPredicted RBP6.47□□□□□ -1.37
HMGN1-205ENST00000419378 PTPN13Q12923 2485 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 A0A088AWK7 358 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 IGKV3D-11A0A0A0MRZ8 115 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 LRRC14BA6NHZ5 514 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 FAM227AF5H4B4 570 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 PSMD12O00232 456 aaPredicted RBP6.47□□□□□ -1.37
HMGN1-205ENST00000419378 E2F3O00716 465 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 UQCRHP07919 91 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 SNRPAP09012 282 aaKnown RBP6.47□□□□□ -1.37
HMGN1-205ENST00000419378 RBP1P09455 135 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 ITGAMP11215 1152 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 PCNAP12004 261 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 MAOAP21397 527 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 ZNF10P21506 573 aaPredicted RBP6.47□□□□□ -1.37
HMGN1-205ENST00000419378 CERS1P27544 350 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 HPDP32754 393 aaPredicted RBP6.47□□□□□ -1.37
HMGN1-205ENST00000419378 SLURP1P55000 103 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 MTTPP55157 894 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 RAB38P57729 211 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 AP2B1P63010 937 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 ARG2P78540 354 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 BTG2P78543 158 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 GTF2H2Q13888 395 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 RUNX2Q13950 521 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 SLC29A2Q14542 456 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 INPP5JQ15735 1006 aaPredicted RBP6.47□□□□□ -1.37
HMGN1-205ENST00000419378 BTBD16Q32M84 506 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 SFT2D3Q587I9 215 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 B3GNTL1Q67FW5 361 aaPredicted RBP6.47□□□□□ -1.37
HMGN1-205ENST00000419378 GTF2H2CQ6P1K8 395 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 METTL2BQ6P1Q9 378 aaKnown RBP6.47□□□□□ -1.37
HMGN1-205ENST00000419378 MED27Q6P2C8 311 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 TRIM40Q6P9F5 258 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 CUZD1Q86UP6 607 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 MYLK4Q86YV6 388 aaPredicted RBP6.47□□□□□ -1.37
HMGN1-205ENST00000419378 LAS2Q8IYD9 372 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 IQCKQ8N0W5 287 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 EIF1ADQ8N9N8 165 aaKnown RBP6.47□□□□□ -1.37
HMGN1-205ENST00000419378 OR7G3Q8NG95 312 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 ADAMTS18Q8TE60 1221 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 ZNF473Q8WTR7 871 aaKnown RBP6.47□□□□□ -1.37
HMGN1-205ENST00000419378 SNX33Q8WV41 574 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 GCDHQ92947 438 aaPredicted RBP6.47□□□□□ -1.37
HMGN1-205ENST00000419378 UBE2E3Q969T4 207 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 MTBPQ96DY7 904 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 CNDP1Q96KN2 507 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 KCNC2Q96PR1 638 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 F2RL3Q96RI0 385 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 LMF1Q96S06 567 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 SERINC2Q96SA4 455 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 LPAR4Q99677 370 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 NPLQ9BXD5 320 aaPredicted RBP6.47□□□□□ -1.37
HMGN1-205ENST00000419378 MS4A8Q9BY19 250 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 OR10A2Q9H208 303 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 ACTR8Q9H981 624 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 COPS7BQ9H9Q2 264 aaPredicted RBP6.47□□□□□ -1.37
HMGN1-205ENST00000419378 TMCO1Q9UM00 188 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 HECTD1Q9ULT8 2610 aa6.47□□□□□ -1.37
HMGN1-205ENST00000419378 SETXQ7Z333 2677 aaKnown RBP6.47□□□□□ -1.37
HMGN1-205ENST00000419378 IQANK1A0A1B0GTG1 560 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 H0YIV9 168 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 STX16-NPEPL1H3BU86 382 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 SAP18O00422 153 aaKnown RBP6.46□□□□□ -1.38
HMGN1-205ENST00000419378 RTCAO00442 366 aaKnown RBP6.46□□□□□ -1.38
HMGN1-205ENST00000419378 OR7A17O14581 309 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 STX16O14662 325 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 B3GALT2O43825 422 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 UGDHO60701 494 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 SMIM24O75264 130 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 VPS4BO75351 444 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 SH3BGRLO75368 114 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 SCELO95171 688 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 SBK3P0C264 359 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 ICAM2P13598 275 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 TNFRSF8P28908 595 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 EEF1DP29692 281 aaKnown RBP6.46□□□□□ -1.38
HMGN1-205ENST00000419378 SERPINB1P30740 379 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 TSFMP43897 325 aaKnown RBP6.46□□□□□ -1.38
HMGN1-205ENST00000419378 PIK3CGP48736 1102 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 HNRNPFP52597 415 aaKnown RBP6.46□□□□□ -1.38
HMGN1-205ENST00000419378 OR4D2P58180 307 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 SLC26A5P58743 744 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 ACTN3Q08043 901 aaPredicted RBP6.46□□□□□ -1.38
HMGN1-205ENST00000419378 TGM3Q08188 693 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 MGAT2Q10469 447 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 DDX39BQ13838 428 aaKnown RBP6.46□□□□□ -1.38
HMGN1-205ENST00000419378 ZNF169Q14929 603 aaPredicted RBP6.46□□□□□ -1.38
HMGN1-205ENST00000419378 EXT1Q16394 746 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 TMEM35AQ53FP2 167 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 ZMAT1Q5H9K5 638 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 LGSNQ5TDP6 509 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 KHDRBS2Q5VWX1 349 aaKnown RBP6.46□□□□□ -1.38
HMGN1-205ENST00000419378 LIPJQ5W064 366 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 FAM180AQ6UWF9 173 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 ZNF793Q6ZN11 406 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 TIFABQ6ZNK6 161 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms