RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 NOP53Q9NZM5 478 aaKnown RBP12.39□□□□□ -0.43
TMEM248-203ENST00000418375 MYOTQ9UBF9 498 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 MARCOQ9UEW3 520 aaPredicted RBP12.39□□□□□ -0.43
TMEM248-203ENST00000418375 BAIAP2L1Q9UHR4 511 aa12.39□□□□□ -0.43
TMEM248-203ENST00000418375 DOCK10Q96BY6 2186 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 TRAV17A0A0B4J275 112 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 TCP11X1B4DZS4 312 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 HRKO00198 91 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 AKAP10O43572 662 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 PRKNO60260 465 aaPredicted RBP12.38□□□□□ -0.43
TMEM248-203ENST00000418375 MAN1A2O60476 641 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 TBX19O60806 448 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 ITGA10O75578 1167 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 LRATO95237 230 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 F10P00742 488 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 LBPP18428 481 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 TNFSF10P50591 281 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 SSR4P51571 173 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 FUT7Q11130 342 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 TUBA3CQ13748 450 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 ZNF169Q14929 603 aaPredicted RBP12.38□□□□□ -0.43
TMEM248-203ENST00000418375 CEBPEQ15744 281 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 PRICKLE4Q2TBC4 344 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 PLEKHN1Q494U1 663 aaPredicted RBP12.38□□□□□ -0.43
TMEM248-203ENST00000418375 FAM180BQ6P0A1 224 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 TUBA3EQ6PEY2 450 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 WDR75Q8IWA0 830 aaKnown RBP12.38□□□□□ -0.43
TMEM248-203ENST00000418375 FAM9CQ8IZT9 166 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 ARFGAP2Q8N6H7 521 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 CLHC1Q8NHS4 586 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 NUBPLQ8TB37 319 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 PIWIL2Q8TC59 973 aaKnown RBP12.38□□□□□ -0.43
TMEM248-203ENST00000418375 ZNF675Q8TD23 568 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 CKAP2Q8WWK9 683 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 GFM2Q969S9 779 aaKnown RBP12.38□□□□□ -0.43
TMEM248-203ENST00000418375 MTERF3Q96E29 417 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 C7orf26Q96N11 449 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 ASIC5Q9NY37 505 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 MAT2BQ9NZL9 334 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 SH3BP4Q9P0V3 963 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 EXO1Q9UQ84 846 aaKnown RBP12.38□□□□□ -0.43
TMEM248-203ENST00000418375 CFL2Q9Y281 166 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 YARS2Q9Y2Z4 477 aaKnown RBP12.38□□□□□ -0.43
TMEM248-203ENST00000418375 CSAG2Q9Y5P2 127 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 NAV2Q8IVL1 2488 aa12.38□□□□□ -0.43
TMEM248-203ENST00000418375 USP9XQ93008 2570 aaPredicted RBP12.37□□□□□ -0.43
TMEM248-203ENST00000418375 MYO1GB0I1T2 1018 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 WWP2O00308 870 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 BCAS2O75934 225 aaPredicted RBP12.37□□□□□ -0.43
TMEM248-203ENST00000418375 CT62P0C5K7 136 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 PRPS1L1P21108 318 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 SSTR4P31391 388 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 TRHRP34981 398 aaPredicted RBP12.37□□□□□ -0.43
TMEM248-203ENST00000418375 CD96P40200 585 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 CYB561P49447 251 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 NCBP2P52298 156 aaKnown RBP eCLIP12.37□□□□□ -0.43
TMEM248-203ENST00000418375 SLC37A1P57057 533 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 DUSP2Q05923 314 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 PDE7AQ13946 482 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 LTB4RQ15722 352 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 HLA-DQA1Q5Y7H0 255 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 FAM111BQ6SJ93 734 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 C9orf40Q8IXQ3 194 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 GPALPP1Q8IXQ4 340 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 TMEM156Q8N614 296 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 CATSPER1Q8NEC5 780 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 ADCY4Q8NFM4 1077 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 OR9A2Q8NGT5 310 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 CTHRC1Q96CG8 243 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 SNRNP40Q96DI7 357 aaKnown RBP12.37□□□□□ -0.43
TMEM248-203ENST00000418375 ERP27Q96DN0 273 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 MAGEB18Q96M61 343 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 GAL3ST4Q96RP7 486 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 PRPF18Q99633 342 aaKnown RBP12.37□□□□□ -0.43
TMEM248-203ENST00000418375 OR10A5Q9H207 317 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 RYDENQ9NUL5 291 aaKnown RBP12.37□□□□□ -0.43
TMEM248-203ENST00000418375 ANKRD10Q9NXR5 420 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 LRFN1Q9P244 771 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 BCAP29Q9UHQ4 241 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 MAPRE3Q9UPY8 281 aa12.37□□□□□ -0.43
TMEM248-203ENST00000418375 USP9YO00507 2555 aaPredicted RBP12.37□□□□□ -0.43
TMEM248-203ENST00000418375 RP1L1Q8IWN7 2480 aaPredicted RBP12.36□□□□□ -0.43
TMEM248-203ENST00000418375 C2orf92A0A1B0GVN3 265 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 TMEM200CA6NKL6 621 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 SDHDO14521 159 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 SCAMP2O15127 329 aaKnown RBP12.36□□□□□ -0.43
TMEM248-203ENST00000418375 PDPK1O15530 556 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 PRAMEF2O60811 474 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 OR2J2O76002 312 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 SLITRK5O94991 958 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 G6PDP11413 515 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 CD46P15529 392 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 PCSK2P16519 638 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 HLCSP50747 726 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 MGAT2Q10469 447 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 MRPL49Q13405 166 aaKnown RBP12.36□□□□□ -0.43
TMEM248-203ENST00000418375 PTGR1Q14914 329 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 EBPQ15125 230 aaKnown RBP12.36□□□□□ -0.43
TMEM248-203ENST00000418375 OR1C1Q15619 314 aa12.36□□□□□ -0.43
TMEM248-203ENST00000418375 MPEG1Q2M385 716 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms