RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 EPN3Q9H201 632 aa11.58□□□□□ -0.56
SKA1-203ENST00000417656 WDR55Q9H6Y2 383 aaPredicted RBP11.58□□□□□ -0.56
SKA1-203ENST00000417656 MED4Q9NPJ6 270 aa11.58□□□□□ -0.56
SKA1-203ENST00000417656 SLAMF7Q9NQ25 335 aa11.58□□□□□ -0.56
SKA1-203ENST00000417656 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.58□□□□□ -0.56
SKA1-203ENST00000417656 ASIC5Q9NY37 505 aa11.58□□□□□ -0.56
SKA1-203ENST00000417656 NOP53Q9NZM5 478 aaKnown RBP11.58□□□□□ -0.56
SKA1-203ENST00000417656 EIF3LQ9Y262 564 aaKnown RBP11.58□□□□□ -0.56
SKA1-203ENST00000417656 B3GNT3Q9Y2A9 372 aa11.58□□□□□ -0.56
SKA1-203ENST00000417656 SMG1Q96Q15 3661 aaKnown RBP11.57□□□□□ -0.56
SKA1-203ENST00000417656 MYO1GB0I1T2 1018 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 SLCO1B7G3V0H7 640 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 SUV39H1O43463 412 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 VPS4BO75351 444 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 OR2J2O76002 312 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 CBX7O95931 251 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 G6PDP11413 515 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 LBPP18428 481 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 EFNA1P20827 205 aaPredicted RBP11.57□□□□□ -0.56
SKA1-203ENST00000417656 EPHA3P29320 983 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 CASRP41180 1078 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 NCBP2P52298 156 aaKnown RBP eCLIP11.57□□□□□ -0.56
SKA1-203ENST00000417656 DIO3P55073 304 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 OC90Q02509 493 aaPredicted RBP11.57□□□□□ -0.56
SKA1-203ENST00000417656 C19orf57Q0VDD7 668 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 TLR1Q15399 786 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 MPEG1Q2M385 716 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 SMU1Q2TAY7 513 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 PLEKHN1Q494U1 663 aaPredicted RBP11.57□□□□□ -0.56
SKA1-203ENST00000417656 SLC9B1Q4ZJI4 515 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 PRR30Q53SZ7 412 aaPredicted RBP11.57□□□□□ -0.56
SKA1-203ENST00000417656 LARP4Q71RC2 724 aaKnown RBP eCLIP11.57□□□□□ -0.56
SKA1-203ENST00000417656 SLC29A4Q7RTT9 530 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 KRTCAP2Q8N6L1 136 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 ZNF615Q8N8J6 731 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 SIMC1Q8NDZ2 872 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 OR7A2PQ8NGA2 310 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 NUBPLQ8TB37 319 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 ZNF675Q8TD23 568 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 HAS2Q92819 552 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 KAT2AQ92830 837 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 ZNF764Q96H86 408 aaPredicted RBP11.57□□□□□ -0.56
SKA1-203ENST00000417656 MAGEB18Q96M61 343 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 SIGLEC12Q96PQ1 595 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 RASL10BQ96S79 203 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 UTP23Q9BRU9 249 aaKnown RBP11.57□□□□□ -0.56
SKA1-203ENST00000417656 WWTR1Q9GZV5 400 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 GLIPR2Q9H4G4 154 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 ANKRA2Q9H9E1 313 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 TAS2R7Q9NYW3 318 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 SH3BP4Q9P0V3 963 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 MYOTQ9UBF9 498 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 DTX4Q9Y2E6 619 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 PCDHGA10Q9Y5H3 936 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 USH1CQ9Y6N9 552 aa11.57□□□□□ -0.56
SKA1-203ENST00000417656 OR6C76A6NM76 312 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 ZNF195O14628 629 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 ATP8B1O43520 1251 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 SLC28A2O43868 658 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 ZNF354AO60765 605 aaPredicted RBP11.56□□□□□ -0.56
SKA1-203ENST00000417656 TBX19O60806 448 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 ALDOCP09972 364 aaKnown RBP11.56□□□□□ -0.56
SKA1-203ENST00000417656 S1PR1P21453 382 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 CD96P40200 585 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 MC3RP41968 323 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 SSR4P51571 173 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 MAP4K2Q12851 820 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 HSPB3Q12988 150 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 OR1C1Q15619 314 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 TRMT12Q53H54 448 aaKnown RBP11.56□□□□□ -0.56
SKA1-203ENST00000417656 OGFOD2Q6N063 350 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 TMEM107Q6UX40 140 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 LRRC34Q8IZ02 419 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 TMEM156Q8N614 296 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 MDS2Q8NDY4 140 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 OR7G2Q8NG99 324 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 OR7G1Q8NGA0 311 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 OR52R1Q8NGF1 315 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 OR5L2Q8NGL0 311 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 C16orf52Q8NHV5 167 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 NUDT8Q8WV74 236 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 ASB15Q8WXK1 588 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 CTHRC1Q96CG8 243 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 AMDHD1Q96NU7 426 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 HES7Q9BYE0 225 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 OR10A5Q9H207 317 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 BCAP29Q9UHQ4 241 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 ATP6V1HQ9UI12 483 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 ZNF639Q9UID6 485 aa11.56□□□□□ -0.56
SKA1-203ENST00000417656 YARS2Q9Y2Z4 477 aaKnown RBP11.56□□□□□ -0.56
SKA1-203ENST00000417656 TRAV17A0A0B4J275 112 aa11.55□□□□□ -0.56
SKA1-203ENST00000417656 PRAMEF2O60811 474 aa11.55□□□□□ -0.56
SKA1-203ENST00000417656 DIAPH2O60879 1101 aa11.55□□□□□ -0.56
SKA1-203ENST00000417656 NME6O75414 186 aaPredicted RBP11.55□□□□□ -0.56
SKA1-203ENST00000417656 OR6B1O95007 311 aa11.55□□□□□ -0.56
SKA1-203ENST00000417656 NADKO95544 446 aaPredicted RBP11.55□□□□□ -0.56
SKA1-203ENST00000417656 GPX3P22352 226 aa11.55□□□□□ -0.56
SKA1-203ENST00000417656 MPIP34949 423 aa11.55□□□□□ -0.56
SKA1-203ENST00000417656 TRHRP34981 398 aaPredicted RBP11.55□□□□□ -0.56
SKA1-203ENST00000417656 RPL3P39023 403 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms