RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 GABARAPL2P60520 117 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 MAP4K2Q12851 820 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 SLC27A4Q6P1M0 643 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 HAGHLQ6PII5 290 aaPredicted RBP12.31□□□□□ -0.44
SCN1B-202ENST00000415950 KLBQ86Z14 1044 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 HUS1BQ8NHY5 278 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 VNN3Q9NY84 501 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 COPS7AQ9UBW8 275 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 SRRDQ9UH36 339 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 PKD1L3Q7Z443 1732 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 TLX3O43711 291 aaPredicted RBP12.31□□□□□ -0.44
SCN1B-202ENST00000415950 SLC16A8O95907 504 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 APC2O95996 2303 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 MTHFD2P13995 350 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 CCKBRP32239 447 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 HMGCLP35914 325 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 HK3P52790 923 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 GARNL3Q5VVW2 1013 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 EIF5AL1Q6IS14 154 aaKnown RBP12.31□□□□□ -0.44
SCN1B-202ENST00000415950 C1orf94Q6P1W5 598 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 B3GLCTQ6Y288 498 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 BEST4Q8NFU0 473 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 DEDD2Q8WXF8 326 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 NSMAFQ92636 917 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 FOXJ1Q92949 421 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 MAELQ96JY0 434 aaKnown RBP12.31□□□□□ -0.44
SCN1B-202ENST00000415950 HCSTQ9UBK5 93 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 MGAT4BQ9UQ53 548 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 MEIOCA2RUB1 952 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 LRRN3E7EW58 273 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 EOMESO95936 686 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 IFNA21P01568 189 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 ANXA3P12429 323 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 VAMP2P63027 116 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 GPR17Q13304 367 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 OCLNQ16625 522 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 DEFB115Q30KQ5 88 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 SLC36A4Q6YBV0 504 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 BCDIN3DQ7Z5W3 292 aaKnown RBP12.31□□□□□ -0.44
SCN1B-202ENST00000415950 SLC30A8Q8IWU4 369 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 CNTN4Q8IWV2 1026 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 RPLP0P6Q8NHW5 317 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 F2RL3Q96RI0 385 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 CACNG6Q9BXT2 260 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 LRRN3Q9H3W5 708 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 GPN2Q9H9Y4 310 aaPredicted RBP12.31□□□□□ -0.44
SCN1B-202ENST00000415950 SARDHQ9UL12 918 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 OARD1Q9Y530 152 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 PRSS21Q9Y6M0 314 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 CDH10Q9Y6N8 788 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 RHPN2P1A8MT19 583 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 FXYD1O00168 92 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 CYB5AP00167 134 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 DAPP51397 102 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 RACK1P63244 317 aaKnown RBP12.3□□□□□ -0.44
SCN1B-202ENST00000415950 PRKCZQ05513 592 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 CTU2Q2VPK5 515 aaKnown RBP12.3□□□□□ -0.44
SCN1B-202ENST00000415950 INAVAQ3KP66 663 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 SPIN3Q5JUX0 258 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 CPZQ66K79 652 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 PGBD5Q8N414 524 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 CIDECQ96AQ7 238 aaPredicted RBP12.3□□□□□ -0.44
SCN1B-202ENST00000415950 RHBDF1Q96CC6 855 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 DPYSL5Q9BPU6 564 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 TMEM185BQ9H7F4 350 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 TMEM150CB9EJG8 249 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 PCDH17O14917 1159 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 LIPAP38571 399 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 RGS6P49758 472 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 GAS6Q14393 721 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 TRAM2Q15035 370 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 HYAL4Q2M3T9 481 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 BCL2L15Q5TBC7 163 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 ZNF691Q5VV52 312 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 TMEM17Q86X19 198 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 CD99L2Q8TCZ2 262 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 MSLNLQ96KJ4 702 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 HSPA12BQ96MM6 686 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 SORBS1Q9BX66 1292 aaKnown RBP12.3□□□□□ -0.44
SCN1B-202ENST00000415950 REEP4Q9H6H4 257 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 NEUROD4Q9HD90 331 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 CD93Q9NPY3 652 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 IL17CQ9P0M4 197 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 PADI2Q9Y2J8 665 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 ZNF705EA8MWA4 302 aaPredicted RBP12.3□□□□□ -0.44
SCN1B-202ENST00000415950 DISC1C4P0D8 188 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 I6L893 689 aaPredicted RBP12.3□□□□□ -0.44
SCN1B-202ENST00000415950 E2F3O00716 465 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 SOCS7O14512 581 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 PTHP01270 115 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 GRPRP30550 384 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 EIF2S3P41091 472 aaKnown RBP12.3□□□□□ -0.44
SCN1B-202ENST00000415950 MBTPS1Q14703 1052 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 LRRTM4Q86VH4 590 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 OR51L1Q8NGJ5 315 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 TSNAXQ99598 290 aaKnown RBP12.3□□□□□ -0.44
SCN1B-202ENST00000415950 GPN3Q9UHW5 284 aaPredicted RBP12.3□□□□□ -0.44
SCN1B-202ENST00000415950 ICE1Q9Y2F5 2266 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 LOC102723532A0A0G2JNH3 316 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 A0A1B0GV50 99 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms