RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 PRKAB2O43741 272 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 PFKFB2O60825 505 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 VPS26AO75436 327 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 CIB2O75838 187 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 IL1BP01584 269 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 HOXB5P09067 269 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 NAGAP17050 411 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 SELENOPP49908 381 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 AIF1P55008 147 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 GEMP55040 296 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 PEX3P56589 373 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 HERV-K104P63124 156 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 CNTN2Q02246 1040 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 ARHGAP1Q07960 439 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 FGL1Q08830 312 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 ELFN2Q5R3F8 820 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 TEX35Q5T0J7 233 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 SNRNP48Q6IEG0 339 aaKnown RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 WASH2PQ6VEQ5 465 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 TMEM64Q6YI46 380 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 ZNF627Q7L945 461 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 SPATA24Q86W54 205 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 TBC1D10CQ8IV04 446 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 C4orf19Q8IY42 314 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 SRRM1Q8IYB3 904 aaKnown RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 RYBPQ8N488 228 aaPredicted RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 ZNF321PQ8N8H1 164 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 BMPERQ8N8U9 685 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 FADS6Q8N9I5 356 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 ZNF383Q8NA42 475 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 OLIG1Q8TAK6 271 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 GPR148Q8TDV2 347 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 ASB5Q8WWX0 329 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 P3H4Q92791 437 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 NXPE2Q96DL1 559 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 OR1F2PQ96R84 312 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 KRT12Q99456 494 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 CRNKL1Q9BZJ0 848 aaKnown RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 FAM192AQ9GZU8 254 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 NACA2Q9H009 215 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 PRORYQ9H606 182 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 TLE6Q9H808 572 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 UBTD1Q9HAC8 227 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 C17orf75Q9HAS0 396 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 MAGEF1Q9HAY2 307 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 ACKR4Q9NPB9 350 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 TRNAU1APQ9NX07 287 aaKnown RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 C6orf203Q9P0P8 240 aaPredicted RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 NID2Q14112 1375 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 FRMPD4Q14CM0 1322 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 TRBV5-3A0A0A0MS03 114 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 TRBV4-1A0A0J9YWV2 114 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 KLF18A0A0U1RQI7 1052 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 SH3PXD2BA1X283 911 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 NEMP2A6NFY4 417 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 ACOD1A6NK06 481 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 ANKRD30BLA7E2S9 258 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 IQCF5A8MTL0 148 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 J3QKU1 62 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 MAPK13O15264 365 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 SPOPO43791 374 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 TOM1L1O75674 476 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 SYF2O95926 243 aaKnown RBP2.34□□□□□ -2.03
MCF2-204ENST00000414978 IGHV2-70P01814 119 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 ITGB3P05106 788 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 FGF5P12034 268 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 HPGDP15428 266 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 THOP1P52888 689 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 DLK1P80370 383 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 ABATP80404 500 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 SLC34A1Q06495 639 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 ST3GAL1Q11201 340 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 ILF2Q12905 390 aaKnown RBP2.34□□□□□ -2.03
MCF2-204ENST00000414978 PDIA5Q14554 519 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 PDK4Q16654 411 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 PRTGQ2VWP7 1150 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 LCNL1Q6ZST4 164 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 PIP4P1Q86T03 277 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 ANKRD46Q86W74 232 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 ZDHHC21Q8IVQ6 265 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 FBXL14Q8N1E6 418 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 FBXL16Q8N461 479 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 RNF148Q8N7C7 305 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 COLGALT1Q8NBJ5 622 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 NPEPL1Q8NDH3 523 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 ZNF548Q8NEK5 533 aaPredicted RBP2.34□□□□□ -2.03
MCF2-204ENST00000414978 OR56B1Q8NGI3 324 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 PPTC7Q8NI37 304 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 SDR42E1Q8WUS8 393 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 SLC9A6Q92581 669 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 PHF21AQ96BD5 680 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 C17orf62Q9BQA9 187 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 ALKBH7Q9BT30 221 aaPredicted RBP2.34□□□□□ -2.03
MCF2-204ENST00000414978 C1QTNF3Q9BXJ4 246 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 NLNQ9BYT8 704 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 RIBC2Q9H4K1 309 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 CATSPERBQ9H7T0 1116 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 RPRD1BQ9NQG5 326 aaKnown RBP2.34□□□□□ -2.03
MCF2-204ENST00000414978 MAD2L2Q9UI95 211 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 KCNJ14Q9UNX9 436 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms