RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 CBX1P83916 185 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 MAD2L1Q13257 205 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 DDX39BQ13838 428 aaKnown RBP12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 BTBD16Q32M84 506 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 ATP6AP1LQ52LC2 224 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 SPDYAQ5MJ70 313 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 Q5PR19 223 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 WASHC2DQ5SRD0 308 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 FBXW10Q5XX13 1052 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 NIPAL1Q6NVV3 410 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 C16orf47Q6ZP98 133 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 PIGWQ7Z7B1 504 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 LGI4Q8N135 537 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 DTWD1Q8N5C7 304 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 ANKS4BQ8N8V4 417 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 OR5M3Q8NGP4 307 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 BCAS4Q8TDM0 211 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 ACTRT2Q8TDY3 377 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 METTL21AQ8WXB1 218 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 TUBGCP3Q96CW5 907 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 RILPQ96NA2 401 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 QRFPRQ96P65 431 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 CCDC28BQ9BUN5 200 aa12.58□□□□□ -0.4
RAPGEF1-204ENST00000414781 A0A088AWK7 358 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 GABRR3A8MPY1 467 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 MAGEB17A8MXT2 336 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 H0YGG7 62 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 ZNF195O14628 629 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 CTSVO60911 334 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 SEMA3DO95025 777 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 IFNA2P01563 188 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 LBPP18428 481 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 ZNF10P21506 573 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 PRPH2P23942 346 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 MAPK1P28482 360 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 EMP3P54852 163 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 VSX2P58304 361 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 ARF3P61204 181 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 RPS13P62277 151 aaKnown RBP12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 SKP1P63208 163 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 MAPKAPK3Q16644 382 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 NDUFA9Q16795 377 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 TCHHL1Q5QJ38 904 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 DEPDC1Q5TB30 811 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 KHDRBS2Q5VWX1 349 aaKnown RBP12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 FCRLBQ6BAA4 426 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 PAGE2Q7Z2X7 111 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 PLD3Q8IV08 490 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 FAM9CQ8IZT9 166 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 RPRMLQ8N4K4 120 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 SLC5A8Q8N695 610 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 ANKRD53Q8N9V6 530 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 OR10Q1Q8NGQ4 319 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 NT5CQ8TCD5 201 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 CREB3L4Q8TEY5 395 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 RGMAQ96B86 450 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 TM4SF19Q96DZ7 209 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 LRRC46Q96FV0 321 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 YIPF2Q9BWQ6 316 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 ROGDIQ9GZN7 287 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 SPNS1Q9H2V7 528 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 TUBB1Q9H4B7 451 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 KCNK13Q9HB14 408 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 TCF7L2Q9NQB0 619 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 FARSBQ9NSD9 589 aaKnown RBP12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 C1orf109Q9NX04 203 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 C19orf25Q9UFG5 118 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 CBLCQ9ULV8 474 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 SLC12A4Q9UP95 1085 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 TMED5Q9Y3A6 229 aa12.57□□□□□ -0.4
RAPGEF1-204ENST00000414781 GOLGA8QA0A0J9YX86 632 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 GOLGA8OA6NCC3 632 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 LRIT2A6NDA9 550 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 FAM47E-STBD1D6RA91 191 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 GOLGA8NF8WBI6 632 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 NDUFS4O43181 175 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 CDC40O60508 579 aaKnown RBP eCLIP12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 SEC22BO75396 215 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 TGFB1P01137 390 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 EIF2S1P05198 315 aaKnown RBP12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 RAP1GDS1P52306 607 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 EXT1Q16394 746 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 AP5B1Q2VPB7 878 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 SPIN4Q56A73 249 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 XKR7Q5GH72 579 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 GARNL3Q5VVW2 1013 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 NXNQ6DKJ4 435 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 PODNL1Q6PEZ8 512 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 SCIMPQ6UWF3 145 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 Q6ZSR9 355 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 ABHD13Q7L211 337 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 SPATA19Q7Z5L4 167 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 P3H2Q8IVL5 708 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 LRRC75A-AS1Q8N1F1 130 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 CIARTQ8N365 385 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 CSNK1A1LQ8N752 337 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 RFWD2Q8NHY2 731 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 MAELQ96JY0 434 aaKnown RBP12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 TMEM120AQ9BXJ8 343 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms