RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 HMGB4Q8WW32 186 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ASB5Q8WWX0 329 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 SORCS1Q8WY21 1168 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 OSTF1Q92882 214 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 SMARCD2Q92925 531 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 FOXRED1Q96CU9 486 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 FAR2Q96K12 515 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 LRR1Q96L50 414 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 C16orf92Q96LL3 132 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 WFIKKN1Q96NZ8 548 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 PRAP1Q96NZ9 151 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 LRRC3BQ96PB8 259 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 TSSK3Q96PN8 268 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 QKIQ96PU8 341 aaKnown RBP eCLIP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 SLC22A12Q96S37 553 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 CCT8L2Q96SF2 557 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 NICN1Q9BSH3 213 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 SOX7Q9BT81 388 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 MYL10Q9BUA6 226 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 NMNAT2Q9BZQ4 307 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 UCK2Q9BZX2 261 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 STRADBQ9C0K7 418 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 NMUR2Q9GZQ4 415 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 SRRQ9GZT4 340 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 NUAK2Q9H093 628 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 PCBD2Q9H0N5 130 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 HRH4Q9H3N8 390 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 FZD8Q9H461 694 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ELOVL6Q9H5J4 265 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 WDCPQ9H6R7 721 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 SRD5A3Q9H8P0 318 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 IPPKQ9H8X2 491 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ANKZF1Q9H8Y5 726 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 WDR54Q9H977 334 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 LMAN1LQ9HAT1 526 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 MAGEF1Q9HAY2 307 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 SLC6A20Q9NP91 592 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 OR2S2Q9NQN1 319 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 VNN3Q9NY84 501 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ARPP21Q9UBL0 812 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 NDRG3Q9UGV2 375 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ZFP69BQ9UJL9 534 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 ANAPC7Q9UJX3 599 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 FBXW11Q9UKB1 542 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 DNAJC12Q9UKB3 198 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 MGAT4AQ9UM21 535 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 NDRG2Q9UN36 371 aaKnown RBP3.42□□□□□ -1.86
SF3B1-203ENST00000414174 PSG11Q9UQ72 335 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 TP53TG5Q9Y2B4 290 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 PCDHA13Q9Y5I0 950 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 AUP1Q9Y679 476 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 USH1CQ9Y6N9 552 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 URGCP-MRPS24S4R325 110 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 RB1CC1Q8TDY2 1594 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 TRAV26-1A0A087WT03 109 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 A0A1B0GV90 55 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 C2orf78A6NCI8 922 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 C9orf118A6NHY6 69 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 FAM90A8PA6NJQ4 464 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 GRXCR1A8MXD5 290 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 NEDD8-MDP1E9PL57 170 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 SMLR1H3BR10 107 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 ACOT7O00154 380 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 LEFTY2O00292 366 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 CFLARO15519 480 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 GPR42O15529 346 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 NDUFS4O43181 175 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 AQP9O43315 295 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 DHHO43323 396 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 OR7A10O76100 309 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 PRSS23O95084 383 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 SEC24AO95486 1093 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 ANGPTL1O95841 491 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 FADS2O95864 444 aaKnown RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 CST4P01036 141 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 IFNA4P05014 189 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 HEXAP06865 529 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 FAM90A13PP0C7W8 464 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 FAM90A24PP0C7X0 464 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 FTH1P19P0C7X4 201 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 HSPD1P10809 573 aaKnown RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 TPH1P17752 444 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 CD22P20273 847 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 UGT1A4P22310 534 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 MMP8P22894 467 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 HLA-DMAP28067 261 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 GTF2E2P29084 291 aaKnown RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 PRDX6P30041 224 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 FCGR2BP31994 310 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 THBS4P35443 961 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 UGT1A3P35503 534 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 UGT1A5P35504 534 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 CEACAM3P40198 252 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 CEACAM6P40199 344 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 RGS6P49758 472 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 STK19P49842 368 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 PPT1P50897 306 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 RPL14P50914 215 aaKnown RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 CNN1P51911 297 aaKnown RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 NDST1P52848 882 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms