RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 OR8J2Q8NGG1 315 aa28.44■■■□□ 2.14
CSNK1E-206ENST00000413574 ZNF675Q8TD23 568 aa28.44■■■□□ 2.14
CSNK1E-206ENST00000413574 ZBTB18Q99592 522 aa28.44■■■□□ 2.14
CSNK1E-206ENST00000413574 ZNF385DQ9H6B1 395 aa28.44■■■□□ 2.14
CSNK1E-206ENST00000413574 ACSS1Q9NUB1 689 aaPredicted RBP28.44■■■□□ 2.14
CSNK1E-206ENST00000413574 ZNF639Q9UID6 485 aa28.44■■■□□ 2.14
CSNK1E-206ENST00000413574 PIEZO2Q9H5I5 2752 aa28.44■■■□□ 2.14
CSNK1E-206ENST00000413574 NME6O75414 186 aaPredicted RBP28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 CEACAM4O75871 244 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 FAM87AP0C7U9 286 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 DDX5P17844 614 aaKnown RBP28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 MC3RP41968 323 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 CDK9P50750 372 aaKnown RBP28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 SLC37A1P57057 533 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 DUSP8Q13202 625 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 MYBPC3Q14896 1274 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 MAGED4Q96JG8 741 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 ART5Q96L15 291 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 LIN28AQ9H9Z2 209 aaKnown RBP28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 C6orf47O95873 294 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 CBX7O95931 251 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 S100A3P33764 101 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 MRPL19P49406 292 aaKnown RBP28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 SQLEQ14534 574 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 ANKRD46Q86W74 232 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 CLECL1Q8IZS7 167 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 ZNF615Q8N8J6 731 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 NPAS2Q99743 824 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 DEFB126Q9BYW3 111 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 EPN3Q9H201 632 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 OR10A5Q9H207 317 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 ZNF552Q9H707 407 aaPredicted RBP28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 BCAP29Q9UHQ4 241 aa28.43■■■□□ 2.14
CSNK1E-206ENST00000413574 MAN1A2O60476 641 aa28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 SNX3O60493 162 aa28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 SCN2BO60939 215 aa28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 GPC1P35052 558 aa28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 ST13P50502 369 aaKnown RBP28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 ATP4BP51164 291 aa28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 IRAK1BP1Q5VVH5 260 aa28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 METTL21CQ5VZV1 264 aa28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 HSDL2Q6YN16 418 aa28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 RNF111Q6ZNA4 994 aa28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 C16orf47Q6ZP98 133 aaPredicted RBP28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 FUNDC1Q8IVP5 155 aa28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 C9orf40Q8IXQ3 194 aa28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 GLB1L3Q8NCI6 653 aaPredicted RBP28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 ZFP28Q8NHY6 868 aa28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 ELP4Q96EB1 424 aa28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 ARHGAP9Q9BRR9 750 aa28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 CCDC167Q9P0B6 97 aa28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 KMT2BQ9UMN6 2715 aaPredicted RBP28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 CPAMD8Q8IZJ3 1885 aa28.42■■■□□ 2.14
CSNK1E-206ENST00000413574 PGRP06401 933 aa28.41■■■□□ 2.14
CSNK1E-206ENST00000413574 POLR2JP52435 117 aaKnown RBP28.41■■■□□ 2.14
CSNK1E-206ENST00000413574 DPY19L1Q2PZI1 675 aa28.41■■■□□ 2.14
CSNK1E-206ENST00000413574 FHL5Q5TD97 284 aa28.41■■■□□ 2.14
CSNK1E-206ENST00000413574 JMJD6Q6NYC1 403 aaPredicted RBP28.41■■■□□ 2.14
CSNK1E-206ENST00000413574 OR52R1Q8NGF1 315 aa28.41■■■□□ 2.14
CSNK1E-206ENST00000413574 SLC25A23Q9BV35 468 aa28.41■■■□□ 2.14
CSNK1E-206ENST00000413574 ERVK-11Q9UQG0 969 aa28.41■■■□□ 2.14
CSNK1E-206ENST00000413574 BSNQ9UPA5 3926 aa28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 SHOX2O60902 331 aaPredicted RBP28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 ABCB1P08183 1280 aaPredicted RBP28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 AP2B1P63010 937 aa28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 RNF4P78317 190 aa28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 RHDQ02161 417 aa28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 H3F3CQ6NXT2 135 aa28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 NATD1Q8N6N6 113 aa28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 ZBTB20Q9HC78 741 aaPredicted RBP28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 TMEM200CA6NKL6 621 aa28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 K7EM74 188 aa28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 CFLARO15519 480 aa28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 MLC1Q15049 377 aa28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 AGKQ53H12 422 aa28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 OR5P2Q8WZ92 322 aa28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 VPS33AQ96AX1 596 aa28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 ABHD17AQ96GS6 310 aa28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 OR52E6Q96RD3 313 aa28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 CDCP1Q9H5V8 836 aa28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 SIRT3Q9NTG7 399 aaPredicted RBP28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 DTX4Q9Y2E6 619 aa28.4■■■□□ 2.14
CSNK1E-206ENST00000413574 FAM234BA2RU67 622 aa28.39■■■□□ 2.13
CSNK1E-206ENST00000413574 UPK1AO00322 258 aa28.39■■■□□ 2.13
CSNK1E-206ENST00000413574 PLOD2O00469 737 aa28.39■■■□□ 2.13
CSNK1E-206ENST00000413574 RNASET2O00584 256 aaKnown RBP28.39■■■□□ 2.13
CSNK1E-206ENST00000413574 PLOD3O60568 738 aa28.39■■■□□ 2.13
CSNK1E-206ENST00000413574 ZFAND5O76080 213 aa28.39■■■□□ 2.13
CSNK1E-206ENST00000413574 HBA1P69905 142 aa28.39■■■□□ 2.13
CSNK1E-206ENST00000413574 UBAP2LQ14157 1087 aaKnown RBP28.39■■■□□ 2.13
CSNK1E-206ENST00000413574 TIGD2Q4W5G0 525 aa28.39■■■□□ 2.13
CSNK1E-206ENST00000413574 AGAP7PQ5VUJ5 663 aa28.39■■■□□ 2.13
CSNK1E-206ENST00000413574 TCTN3Q6NUS6 607 aa28.39■■■□□ 2.13
CSNK1E-206ENST00000413574 LINC00696Q6ZRV3 163 aa28.39■■■□□ 2.13
CSNK1E-206ENST00000413574 OR7G1Q8NGA0 311 aa28.39■■■□□ 2.13
CSNK1E-206ENST00000413574 C16orf52Q8NHV5 167 aa28.39■■■□□ 2.13
CSNK1E-206ENST00000413574 AGAP4Q96P64 663 aa28.39■■■□□ 2.13
CSNK1E-206ENST00000413574 CCT8L2Q96SF2 557 aa28.38■■■□□ 2.13
CSNK1E-206ENST00000413574 CXorf36Q9H7Y0 433 aa28.38■■■□□ 2.13
CSNK1E-206ENST00000413574 SAR1AQ9NR31 198 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms