RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 APH1BQ8WW43 257 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 GIMAP1Q8WWP7 306 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 CXorf40BQ96DE9 158 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 MNTQ99583 582 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 DPYSL5Q9BPU6 564 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 PAAF1Q9BRP4 392 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 PADI3Q9ULW8 664 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 DIMT1Q9UNQ2 313 aaKnown RBP13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 CDK5RAP2Q96SN8 1893 aa13.23□□□□□ -0.29
CLTCL1-201ENST00000412649 LALBAP00709 142 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 HRGP04196 525 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 STK19P49842 368 aaPredicted RBP13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 ZNF234Q14588 700 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 RAB12Q6IQ22 244 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 MTSS1LQ765P7 747 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 GPR142Q7Z601 462 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 ADGRF3Q8IZF5 1079 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 FAM98AQ8NCA5 519 aaKnown RBP13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 P2RY13Q9BPV8 354 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 HHATLQ9HCP6 504 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 ELOVL2Q9NXB9 296 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 RNASET2O00584 256 aaKnown RBP13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 PRAF2O60831 178 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 RORAP35398 523 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 MNDAP41218 407 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 RFX2P48378 723 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 CENPAP49450 140 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 GBX2P52951 348 aaPredicted RBP13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 KCNC3Q14003 757 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 SMCO1Q147U7 214 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 TRAM1Q15629 374 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 CXCL17Q6UXB2 119 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 PRSS42Q7Z5A4 293 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 A0A0G2JLL6 359 aaPredicted RBP13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 OR2AT4A6NND4 320 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 ATP1B2P14415 290 aaPredicted RBP13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 ST3GAL3Q11203 375 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 ELOAQ14241 798 aaKnown RBP13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 GPR176Q14439 515 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 PRRT2Q7Z6L0 340 aaPredicted RBP13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 C2orf73Q8N5S3 287 aaPredicted RBP13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 ACBD7Q8N6N7 88 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 TMEM40Q8WWA1 233 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 AIF1LQ9BQI0 150 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 NXF2Q9GZY0 626 aaKnown RBP13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 SLC6A13Q9NSD5 602 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 SDHAF2Q9NX18 166 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 UPB1Q9UBR1 384 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 GJD2Q9UKL4 321 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 FZD9O00144 591 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 GABRPO00591 440 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 ACPPP15309 386 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 RAB3BP20337 219 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 GK2Q14410 553 aaPredicted RBP13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 PRPF38BQ5VTL8 546 aaKnown RBP13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 MLIPQ5VWP3 458 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 FCAMRQ8WWV6 532 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 COL26A1Q96A83 441 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 MCCC1Q96RQ3 725 aaPredicted RBP13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 ASF1AQ9Y294 204 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 HRH3Q9Y5N1 445 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 STON1Q9Y6Q2 735 aa13.22□□□□□ -0.29
CLTCL1-201ENST00000412649 ZNFX1Q9P2E3 1918 aaKnown RBP13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 SHOXO15266 292 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 TAPBPO15533 448 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 CELF2O95319 508 aaKnown RBP13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 TCRBP04435 133 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 TPOP07202 933 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 SNRPGP62308 76 aaKnown RBP13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 ERVK-25P63136 954 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 RING1Q06587 406 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 C3orf38Q5JPI3 329 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 TMIGD1Q6UXZ0 262 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 LRRTM3Q86VH5 581 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 OR4C6Q8NH72 309 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 PLD4Q96BZ4 506 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 TMEM19Q96HH6 336 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 PELOQ9BRX2 385 aaKnown RBP13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 SLC7A5P2Q9GIP4 190 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 TREM1Q9NP99 234 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 IMP3Q9NV31 184 aaKnown RBP13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 DNMT3BQ9UBC3 853 aaKnown RBP13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 CIB4A0PJX0 185 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 MEIS3P2A8K0S8 358 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 ZNF879B4DU55 563 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 RPN2P04844 631 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 RAB3AP20336 220 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 CRYZQ08257 329 aaKnown RBP13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 ILKQ13418 452 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 TRAM2Q15035 370 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 FXNQ16595 210 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 OLFML2AQ68BL7 652 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 RNF175Q8N4F7 328 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 OR8K3Q8NH51 312 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 C15orf40Q8WUR7 153 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 FATE1Q969F0 183 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 C7orf50Q9BRJ6 194 aaKnown RBP13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 YIPF4Q9BSR8 244 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 SLC12A9Q9BXP2 914 aa13.21□□□□□ -0.29
CLTCL1-201ENST00000412649 RASD1Q9Y272 281 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms