RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 ST8SIA5O15466 376 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 SLC25A12O75746 678 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 HEXBP07686 556 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 PPP3CBP16298 524 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 ITPKBP27987 946 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 NDUFS1P28331 727 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 ADARB1P78563 741 aaKnown RBP8.13□□□□□ -1.11
PBRM1-209ENST00000412587 SNTB2Q13425 540 aaKnown RBP8.13□□□□□ -1.11
PBRM1-209ENST00000412587 RAB33AQ14088 237 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 CYP27C1Q4G0S4 372 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 SLC22A10Q63ZE4 541 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 LYPD8Q6UX82 237 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 WASH2PQ6VEQ5 465 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 METTL21AQ8WXB1 218 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 ACOT12Q8WYK0 555 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 PYCR2Q96C36 320 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 OR4K3Q96R72 315 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 ELOVL2Q9NXB9 296 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 MS4A12Q9NXJ0 267 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 SAGE1Q9NXZ1 904 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 FBXW2Q9UKT8 454 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 MYH3P11055 1940 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-209ENST00000412587 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-209ENST00000412587 OR5K3A6NET4 321 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 HAS3O00219 553 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 CREG1O75629 220 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 RETP07949 1114 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 OXTRP30559 389 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 RPL4P36578 427 aaKnown RBP8.13□□□□□ -1.11
PBRM1-209ENST00000412587 CLCNKAP51800 687 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 CDH12P55289 794 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 FCN2Q15485 313 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 ZNF783Q6ZMS7 281 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 WDR53Q7Z5U6 358 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-209ENST00000412587 ZFP82Q8N141 532 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 GTPBP8Q8N3Z3 284 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-209ENST00000412587 SLC22A18Q96BI1 424 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 RRNAD1Q96FB5 475 aaKnown RBP8.13□□□□□ -1.11
PBRM1-209ENST00000412587 FCRL3Q96P31 734 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-209ENST00000412587 OR2M4Q96R27 311 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 MTERF1Q99551 399 aaKnown RBP8.13□□□□□ -1.11
PBRM1-209ENST00000412587 EXO5Q9H790 373 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 ASF1BQ9NVP2 202 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 SEC14L3Q9UDX4 400 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 SLC23A1Q9UHI7 598 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 LOC105369274A0A096LPK9 316 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 MCIDASD6RGH6 385 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 SCN2BO60939 215 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 STC2O76061 302 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 GSRP00390 522 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 ATP1B2P14415 290 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-209ENST00000412587 NPRL3Q12980 569 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 SPHARQ15513 63 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 ZNF529Q6P280 563 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 RNF111Q6ZNA4 994 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 CYS1Q717R9 158 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 TMCO2Q7Z6W1 182 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-209ENST00000412587 OR4N4Q8N0Y3 316 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 LIX1Q8N485 282 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 IGSF8Q969P0 613 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 KIAA1143Q96AT1 154 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-209ENST00000412587 ST6GAL2Q96JF0 529 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 SIGLEC10Q96LC7 697 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 CCM2Q9BSQ5 444 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 EFCAB11Q9BUY7 163 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 EBPLQ9BY08 206 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 MEAF6Q9HAF1 191 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 NANSQ9NR45 359 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 KLHL42Q9P2K6 505 aa8.13□□□□□ -1.11
PBRM1-209ENST00000412587 GON4LQ3T8J9 2241 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 C2orf78A6NCI8 922 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 SOCS5O75159 536 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 HLA-DQA2P01906 255 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 CFIP05156 583 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 RD3LP0DJH9 198 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 C1QTNF8P60827 252 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 RPS14P62263 151 aaKnown RBP8.12□□□□□ -1.11
PBRM1-209ENST00000412587 SEMA3BQ13214 749 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 LRRC32Q14392 662 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 CLLU1OSQ5K130 101 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 PDSS1Q5T2R2 415 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 PRAMEF17Q5VTA0 474 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 CNIH2Q6PI25 160 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 C5orf46Q6UWT4 87 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 COMMD2Q86X83 199 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 NRSN1Q8IZ57 195 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 ZNF527Q8NB42 609 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 OR52J3Q8NH60 311 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 RBM18Q96H35 190 aaKnown RBP8.12□□□□□ -1.11
PBRM1-209ENST00000412587 OPALINQ96PE5 141 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 MAGIXQ9H6Y5 334 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 GALNT9Q9HCQ5 603 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 MRPS30Q9NP92 439 aaKnown RBP8.12□□□□□ -1.11
PBRM1-209ENST00000412587 RPS10P5Q9NQ39 176 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 SDHAF3Q9NRP4 125 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 TEX10Q9NXF1 929 aaPredicted RBP8.12□□□□□ -1.11
PBRM1-209ENST00000412587 TRPS1Q9UHF7 1281 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 PCDHGB7Q9Y5F8 929 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 CIB4A0PJX0 185 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms