RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 ITGA10O75578 1167 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 CBX7O95931 251 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 EFNA1P20827 205 aaPredicted RBP12.94□□□□□ -0.34
CPNE1-206ENST00000412056 CLDN8P56748 225 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 ARG2P78540 354 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 GUCY1A3Q02108 690 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 KLRB1Q12918 225 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 DUSP8Q13202 625 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 EBPQ15125 230 aaKnown RBP12.94□□□□□ -0.34
CPNE1-206ENST00000412056 ZNF468Q5VIY5 522 aaPredicted RBP12.94□□□□□ -0.34
CPNE1-206ENST00000412056 TMEM198Q66K66 360 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 EPGNQ6UW88 154 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 ZNF551Q7Z340 670 aaPredicted RBP12.94□□□□□ -0.34
CPNE1-206ENST00000412056 R3HCC1LQ7Z5L2 792 aaKnown RBP12.94□□□□□ -0.34
CPNE1-206ENST00000412056 RIMKLAQ8IXN7 391 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 ZNF843Q8N446 348 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 ZNF615Q8N8J6 731 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 TEX19Q8NA77 164 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 CATSPER1Q8NEC5 780 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 ACTRT2Q8TDY3 377 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 THOC1Q96FV9 657 aaKnown RBP12.94□□□□□ -0.34
CPNE1-206ENST00000412056 MARK4Q96L34 752 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 AMDHD1Q96NU7 426 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 OR52B2Q96RD2 323 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 EBF4Q9BQW3 602 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 RNF32Q9H0A6 362 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 OR10A5Q9H207 317 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.94□□□□□ -0.349e-7■□□□□ 11
CPNE1-206ENST00000412056 AIG1Q9NVV5 245 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 ANKRD10Q9NXR5 420 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 ABI3Q9P2A4 366 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 BCAP29Q9UHQ4 241 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 TLN1Q9Y490 2541 aaKnown RBP12.94□□□□□ -0.34
CPNE1-206ENST00000412056 ATMQ13315 3056 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 OR5H15A6NDH6 313 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 OR6C76A6NM76 312 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 FCHO1O14526 889 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 ANKRD28O15084 1053 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 LAMP1P11279 417 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 PRPS1L1P21108 318 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 MPIP34949 423 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 RPL3P39023 403 aaKnown RBP12.93□□□□□ -0.34
CPNE1-206ENST00000412056 FRKP42685 505 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-206ENST00000412056 C21orf58P58505 322 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 HSPB3Q12988 150 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 TUBA3CQ13748 450 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 LSM12Q3MHD2 195 aaKnown RBP12.93□□□□□ -0.34
CPNE1-206ENST00000412056 TUBA3EQ6PEY2 450 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 Q6ZS92 163 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 SLC29A4Q7RTT9 530 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 SPATA19Q7Z5L4 167 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 OR7G2Q8NG99 324 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 OR7G1Q8NGA0 311 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 OR52R1Q8NGF1 315 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 C16orf52Q8NHV5 167 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 NUBPLQ8TB37 319 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 HAS2Q92819 552 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 GAL3ST4Q96RP7 486 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 DPY30Q9C005 99 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 WWTR1Q9GZV5 400 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 MYOTQ9UBF9 498 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 DTX4Q9Y2E6 619 aa12.93□□□□□ -0.34
CPNE1-206ENST00000412056 ZNF354AO60765 605 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-206ENST00000412056 NME6O75414 186 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-206ENST00000412056 OR2J2O76002 312 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 TGDSO95455 350 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 GPX3P22352 226 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 CD96P40200 585 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 MC3RP41968 323 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 IDH3AP50213 366 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 CDK9P50750 372 aaKnown RBP12.92□□□□□ -0.34
CPNE1-206ENST00000412056 SSR4P51571 173 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 AQP5P55064 265 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 NME5P56597 212 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 PLEKHN1Q494U1 663 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-206ENST00000412056 CPTPQ5TA50 214 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 FHL5Q5TD97 284 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 TMEM107Q6UX40 140 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 ACAD11Q709F0 780 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 ZNF441Q8N8Z8 693 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 Q8NA96 180 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 MDS2Q8NDY4 140 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 OR5L2Q8NGL0 311 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 CEP70Q8NHQ1 597 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 ZFP28Q8NHY6 868 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 PNPLA2Q96AD5 504 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 COQ8BQ96D53 544 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 ZBED6CLQ96FA7 236 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-206ENST00000412056 SIGLEC12Q96PQ1 595 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 RASL10BQ96S79 203 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 UTP23Q9BRU9 249 aaKnown RBP12.92□□□□□ -0.34
CPNE1-206ENST00000412056 ITPAQ9BY32 194 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.92□□□□□ -0.345e-12■■■■□ 21.5
CPNE1-206ENST00000412056 TCF7L2Q9NQB0 619 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 FGFR1OP2Q9NVK5 253 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 B3GNT3Q9Y2A9 372 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 YARS2Q9Y2Z4 477 aaKnown RBP12.92□□□□□ -0.34
CPNE1-206ENST00000412056 GPR45Q9Y5Y3 372 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 NBEAQ8NFP9 2946 aa12.92□□□□□ -0.34
CPNE1-206ENST00000412056 C2orf92A0A1B0GVN3 265 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms