RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 TAS2R42Q7RTR8 314 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ARPINQ7Z6K5 226 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 SYT12Q8IV01 421 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 KATNAL2Q8IYT4 538 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ADGRG5Q8IZF4 528 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ZCCHC7Q8N3Z6 543 aaKnown RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 LIX1Q8N485 282 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 UXS1Q8NBZ7 420 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 PDPRQ8NCN5 879 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 CCNYQ8ND76 341 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 NUP43Q8NFH3 380 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 NLGN4YQ8NFZ3 816 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 OR13C2Q8NGS9 318 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 OR8K5Q8NH50 307 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 GRPEL2Q8TAA5 225 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ZNF671Q8TAW3 534 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 TBC1D15Q8TC07 691 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 FANK1Q8TC84 345 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 PTPMT1Q8WUK0 201 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 LPGAT1Q92604 370 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 FAM131CQ96AQ9 280 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ISG20Q96AZ6 181 aaKnown RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 TMEM186Q96B77 213 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 BIRC7Q96CA5 298 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 PDXPQ96GD0 296 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ARL5BQ96KC2 179 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ZNF578Q96N58 590 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 LRRC37BQ96QE4 947 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 SMIM14Q96QK8 99 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 COQ7Q99807 217 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 VKORC1Q9BQB6 163 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 TUBA1CQ9BQE3 449 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 BCL7BQ9BQE9 202 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 WRAP53Q9BUR4 548 aaKnown RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 C7orf69Q9H7B7 122 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 RMND5AQ9H871 391 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 DYRK4Q9NR20 520 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 OLAHQ9NV23 265 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ING3Q9NXR8 418 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 SMPD3Q9NY59 655 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 TMEM9Q9P0T7 183 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ATP6V1HQ9UI12 483 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 POU2F3Q9UKI9 436 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 AMFRQ9UKV5 643 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 PSME2Q9UL46 239 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 FZD4Q9ULV1 537 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 PLAGL1Q9UM63 463 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 NCKAP1Q9Y2A7 1128 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 DTX4Q9Y2E6 619 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 WBP11Q9Y2W2 641 aaKnown RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 VWA7Q9Y334 891 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 THADAQ6YHU6 1953 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 A0A0A6YYC8 382 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-202ENST00000409915 A0A1B0GVT2 93 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 A0A1B0GWJ7 208 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 LNP1A1A4G5 178 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 ELOVL7A1L3X0 281 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 C5orf51A6NDU8 294 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 CCDC160A6NGH7 325 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 A8MX80 341 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-202ENST00000409915 ZNF487B1APH4 448 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 H7C0C1 242 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 I3L1I5 382 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-202ENST00000409915 IFNL4K9M1U5 179 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 SLC30A4O14863 429 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 RAD51BO15315 384 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 SLC31A1O15431 190 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 RAD51CO43502 376 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 GATCO43716 136 aaKnown RBP4.32□□□□□ -1.72
SF3B1-202ENST00000409915 NDUFS3O75489 264 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 GCATO75600 419 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 AGFG2O95081 481 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 BMP10O95393 424 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 IFNA14P01570 189 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 IL1AP01583 271 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 JCHAINP01591 159 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 ESR1P03372 595 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 S100A9P06702 114 aaKnown RBP4.32□□□□□ -1.72
SF3B1-202ENST00000409915 ENO1P06733 434 aaKnown RBP4.32□□□□□ -1.72
SF3B1-202ENST00000409915 ATXN1LP0C7T5 689 aaKnown RBP4.32□□□□□ -1.72
SF3B1-202ENST00000409915 CR2P20023 1033 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 TAC1P20366 129 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 SDHBP21912 280 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 HNRNPA2B1P22626 353 aaKnown RBP4.32□□□□□ -1.72
SF3B1-202ENST00000409915 MAP4P27816 1152 aaKnown RBP4.32□□□□□ -1.72
SF3B1-202ENST00000409915 ALDH4A1P30038 563 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 OXTRP30559 389 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 FMO4P31512 558 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 CSNK1EP49674 416 aaKnown RBP4.32□□□□□ -1.72
SF3B1-202ENST00000409915 CLDN2P57739 230 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 RPP38P78345 283 aaKnown RBP4.32□□□□□ -1.72
SF3B1-202ENST00000409915 OTUD4Q01804 1114 aaKnown RBP4.32□□□□□ -1.72
SF3B1-202ENST00000409915 BNC1Q01954 994 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 ACY1Q03154 408 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 SCGB2A2Q13296 93 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 KIR3DS1Q14943 382 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 SNAPC1Q16533 368 aa4.32□□□□□ -1.72
SF3B1-202ENST00000409915 AASDHQ4L235 1098 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms