RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 REEP4Q9H6H4 257 aa12.97□□□□□ -0.33
GYPC-203ENST00000409836 SLAMF7Q9NQ25 335 aa12.97□□□□□ -0.33
GYPC-203ENST00000409836 NOP53Q9NZM5 478 aaKnown RBP12.97□□□□□ -0.33
GYPC-203ENST00000409836 ATP6V1HQ9UI12 483 aa12.97□□□□□ -0.33
GYPC-203ENST00000409836 SVILO95425 2214 aa12.97□□□□□ -0.33
GYPC-203ENST00000409836 RELNP78509 3460 aa12.97□□□□□ -0.33
GYPC-203ENST00000409836 FLNCQ14315 2725 aa12.97□□□□□ -0.33
GYPC-203ENST00000409836 SCAMP2O15127 329 aaKnown RBP12.96□□□□□ -0.33
GYPC-203ENST00000409836 NME2P1O60361 137 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 PEX11AO75192 247 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 ERAL1O75616 437 aaKnown RBP12.96□□□□□ -0.33
GYPC-203ENST00000409836 OR2J2O76002 312 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 UQCRHP07919 91 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 DDX5P17844 614 aaKnown RBP12.96□□□□□ -0.33
GYPC-203ENST00000409836 GPX3P22352 226 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 NME2P22392 152 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 NTSP30990 170 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 SSTR4P31391 388 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 MPIP34949 423 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 FEN1P39748 380 aaKnown RBP12.96□□□□□ -0.33
GYPC-203ENST00000409836 PSPHP78330 225 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 C2orf80Q0P641 193 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 MLC1Q15049 377 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 OR1C1Q15619 314 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 PDCD2Q16342 344 aaPredicted RBP12.96□□□□□ -0.33
GYPC-203ENST00000409836 GALNTL6Q49A17 601 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 PIGGQ5H8A4 983 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 C6orf163Q5TEZ5 329 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 ZNF324BQ6AW86 544 aaPredicted RBP12.96□□□□□ -0.33
GYPC-203ENST00000409836 LARP4Q71RC2 724 aaKnown RBP eCLIP12.96□□□□□ -0.33
GYPC-203ENST00000409836 SLC29A4Q7RTT9 530 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 PRICKLE2Q7Z3G6 844 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 R3HCC1LQ7Z5L2 792 aaKnown RBP12.96□□□□□ -0.33
GYPC-203ENST00000409836 FAM9CQ8IZT9 166 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 FNDC5Q8NAU1 212 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 CATSPER1Q8NEC5 780 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 C16orf52Q8NHV5 167 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 ZNF75CPQ92670 426 aaPredicted RBP12.96□□□□□ -0.33
GYPC-203ENST00000409836 HOXB13Q92826 284 aaPredicted RBP12.96□□□□□ -0.33
GYPC-203ENST00000409836 TUBGCP3Q96CW5 907 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 AMDHD1Q96NU7 426 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 BTBD9Q96Q07 612 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 PAIP2Q9BPZ3 127 aaKnown RBP12.96□□□□□ -0.33
GYPC-203ENST00000409836 SLX1AQ9BQ83 275 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 MFRPQ9BY79 579 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 OR10A5Q9H207 317 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 SH2D2AQ9NP31 389 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 ACSS1Q9NUB1 689 aaPredicted RBP12.96□□□□□ -0.33
GYPC-203ENST00000409836 PLA2G3Q9NZ20 509 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 NTMQ9P121 344 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 GIMAP2Q9UG22 337 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 MAPRE3Q9UPY8 281 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 CFL2Q9Y281 166 aa12.96□□□□□ -0.33
GYPC-203ENST00000409836 LRRK2Q5S007 2527 aa12.96□□□□□ -0.34
GYPC-203ENST00000409836 EML6Q6ZMW3 1958 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 UQCRHLA0A096LP55 91 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 TRPC5OSA6NMA1 111 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 SDHDO14521 159 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 ZNF195O14628 629 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 ANKRD28O15084 1053 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 ATP8B1O43520 1251 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 ZNF354AO60765 605 aaPredicted RBP12.95□□□□□ -0.34
GYPC-203ENST00000409836 SLC25A12O75746 678 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 BCAS2O75934 225 aaPredicted RBP12.95□□□□□ -0.34
GYPC-203ENST00000409836 PRPS1L1P21108 318 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 NT5EP21589 574 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 HPCAL1P37235 193 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 EMDP50402 254 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 LTB4RQ15722 352 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 INPP5JQ15735 1006 aaPredicted RBP12.95□□□□□ -0.34
GYPC-203ENST00000409836 ZNF791Q3KP31 576 aaPredicted RBP12.95□□□□□ -0.34
GYPC-203ENST00000409836 ZNF385BQ569K4 471 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 ZNF766Q5HY98 468 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 OPN5Q6U736 354 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 CYP4Z2PQ8N1L4 340 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 OR2L13Q8N349 312 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 LIX1Q8N485 282 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 NATD1Q8N6N6 113 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 TMEM178AQ8NBL3 297 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 OR9A2Q8NGT5 310 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 PSMA8Q8TAA3 256 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 PIWIL2Q8TC59 973 aaKnown RBP12.95□□□□□ -0.34
GYPC-203ENST00000409836 SLC22A8Q8TCC7 542 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 CPT1CQ8TCG5 803 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 EXOSC8Q96B26 276 aaKnown RBP12.95□□□□□ -0.34
GYPC-203ENST00000409836 NTNG2Q96CW9 530 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 SNRNP40Q96DI7 357 aaKnown RBP12.95□□□□□ -0.34
GYPC-203ENST00000409836 SGCZQ96LD1 299 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 FRMD6Q96NE9 622 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 TSSK3Q96PN8 268 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 NUF2Q9BZD4 464 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 AKTIPQ9H8T0 292 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 PNPOQ9NVS9 261 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 LRFN1Q9P244 771 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 NTNG1Q9Y2I2 539 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 USP9XQ93008 2570 aaPredicted RBP12.95□□□□□ -0.34
GYPC-203ENST00000409836 TENM4Q6N022 2769 aa12.95□□□□□ -0.34
GYPC-203ENST00000409836 ESPL1Q14674 2120 aa12.94□□□□□ -0.34
GYPC-203ENST00000409836 TO15178 435 aa12.94□□□□□ -0.34
GYPC-203ENST00000409836 ACOX3O15254 700 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms