RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 C2CD4DB7Z1M9 353 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 H7C0C1 242 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 SGK1O00141 431 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 DFFAO00273 331 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 DNALI1O14645 258 aaPredicted RBP3.94□□□□□ -1.78
CLK1-203ENST00000409769 CHADO15335 359 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 KDELR3O43731 214 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 TSPAN9O75954 239 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 BMP10O95393 424 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 GAS8O95995 478 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 PRSS1P07477 247 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 UQCRHP07919 91 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 RHOCP08134 193 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 INHBAP08476 426 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 ZSCAN5DPP0CG00 497 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 CFC1BP0CG36 223 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 CFC1P0CG37 223 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 FGF5P12034 268 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 PSMC3P17980 439 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 CD70P32970 193 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 RPL22P35268 128 aaKnown RBP3.94□□□□□ -1.78
CLK1-203ENST00000409769 OPRD1P41143 372 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 CSKP41240 450 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 CASP2P42575 452 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 MAGEA6P43360 314 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 RPL21P46778 160 aaKnown RBP3.94□□□□□ -1.78
CLK1-203ENST00000409769 ATP5OP48047 213 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 IFNAR2P48551 515 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 MMP15P51511 669 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 VSNL1P62760 191 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 MC1RQ01726 317 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 IL10RBQ08334 325 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 SLC10A7Q0GE19 358 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 AP1B1Q10567 949 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 ZNF177Q13360 481 aaPredicted RBP3.94□□□□□ -1.78
CLK1-203ENST00000409769 CDH18Q13634 790 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 HNRNPDQ14103 355 aaKnown RBP3.94□□□□□ -1.78
CLK1-203ENST00000409769 IHHQ14623 411 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 PDGFRLQ15198 375 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 PPP1R7Q15435 360 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 TRADDQ15628 312 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 TEX44Q53QW1 395 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 ANKRD20A2Q5SQ80 823 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 FAM182AQ5T1J6 154 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 RNASEH2BQ5TBB1 312 aaKnown RBP3.94□□□□□ -1.78
CLK1-203ENST00000409769 ANKRD20A1Q5TYW2 823 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 ANKRD20A3Q5VUR7 823 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 TMEM215Q68D42 235 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 KCTD11Q693B1 232 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 KRTAP5-4Q6L8H1 288 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 TPGS1Q6ZTW0 290 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 SZRD1Q7Z422 152 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 MFN1Q8IWA4 741 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 GPALPP1Q8IXQ4 340 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 APCDD1Q8J025 514 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 ZNF567Q8N184 647 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 CARNMT1Q8N4J0 409 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 ATPAF2Q8N5M1 289 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 ZNF557Q8N988 423 aaPredicted RBP3.94□□□□□ -1.78
CLK1-203ENST00000409769 CCDC89Q8N998 374 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 NAT8LQ8N9F0 302 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 EIF1ADQ8N9N8 165 aaKnown RBP3.94□□□□□ -1.78
CLK1-203ENST00000409769 CCDC110Q8TBZ0 833 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 DDI1Q8WTU0 396 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 ART4Q93070 314 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 TADA1Q96BN2 335 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 CCDC114Q96M63 670 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 ZNF599Q96NL3 588 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 VAT1Q99536 393 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 ERP44Q9BS26 406 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 FEM1AQ9BSK4 669 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 RPP25Q9BUL9 199 aaKnown RBP3.94□□□□□ -1.78
CLK1-203ENST00000409769 BBS2Q9BXC9 721 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 PARD6BQ9BYG5 372 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 SLC2A11Q9BYW1 496 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 RAB17Q9H0T7 212 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 NEUROG2Q9H2A3 272 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 ECT2Q9H8V3 914 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 TRPV5Q9NQA5 729 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 ZDHHC18Q9NUE0 388 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 NSMCE4AQ9NXX6 385 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 PAK5Q9P286 719 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 ZNF148Q9UQR1 794 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 UTP11Q9Y3A2 253 aaKnown RBP3.94□□□□□ -1.78
CLK1-203ENST00000409769 V9GYY5 206 aaPredicted RBP3.94□□□□□ -1.78
CLK1-203ENST00000409769 SCN8AQ9UQD0 1980 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 EYSQ5T1H1 3165 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 XIRP2A4UGR9 3374 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 ZNF106Q9H2Y7 1883 aaKnown RBP3.93□□□□□ -1.78
CLK1-203ENST00000409769 TEX13DA0A0J9YY54 714 aaPredicted RBP3.93□□□□□ -1.78
CLK1-203ENST00000409769 OR2A25A4D2G3 310 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 SHISA7A6NL88 538 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 E7ESA3 106 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 NEDD8-MDP1E9PL57 170 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 H0Y626 953 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 KCNK1O00180 336 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 RNF103O00237 685 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 GPR137BO60478 399 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 SNAP91O60641 907 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 IFNB1P01574 187 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms