RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 BNIP3Q12983 259 aa13.24□□□□□ -0.29
LIMS2-206ENST00000409754 MAPK11Q15759 364 aa13.24□□□□□ -0.29
LIMS2-206ENST00000409754 DEFB110Q30KQ9 67 aa13.24□□□□□ -0.29
LIMS2-206ENST00000409754 FAM92BQ6ZTR7 304 aa13.24□□□□□ -0.29
LIMS2-206ENST00000409754 USP51Q70EK9 711 aa13.24□□□□□ -0.29
LIMS2-206ENST00000409754 PRSS41Q7RTY9 318 aa13.24□□□□□ -0.29
LIMS2-206ENST00000409754 HS3ST5Q8IZT8 346 aa13.24□□□□□ -0.29
LIMS2-206ENST00000409754 ARL10Q8N8L6 244 aa13.24□□□□□ -0.29
LIMS2-206ENST00000409754 SPPL2AQ8TCT8 520 aa13.24□□□□□ -0.29
LIMS2-206ENST00000409754 ZNF285Q96NJ3 590 aa13.24□□□□□ -0.29
LIMS2-206ENST00000409754 ZNF347Q96SE7 839 aa13.24□□□□□ -0.29
LIMS2-206ENST00000409754 REEP1Q9H902 201 aa13.24□□□□□ -0.29
LIMS2-206ENST00000409754 SMURF2Q9HAU4 748 aa13.24□□□□□ -0.29
LIMS2-206ENST00000409754 ANKHQ9HCJ1 492 aa13.24□□□□□ -0.29
LIMS2-206ENST00000409754 NTMQ9P121 344 aa13.24□□□□□ -0.29
LIMS2-206ENST00000409754 TRPC4Q9UBN4 977 aa13.24□□□□□ -0.29
LIMS2-206ENST00000409754 RNF215Q9Y6U7 377 aa13.24□□□□□ -0.29
LIMS2-206ENST00000409754 SCN3AQ9NY46 2000 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.23□□□□□ -0.29
LIMS2-206ENST00000409754 C4orf47A7E2U8 309 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 CYR61O00622 381 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 TM4SF5O14894 197 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 NUDT21O43809 227 aaKnown RBP13.23□□□□□ -0.29
LIMS2-206ENST00000409754 HMGN2P05204 90 aaKnown RBP13.23□□□□□ -0.29
LIMS2-206ENST00000409754 CD59P13987 128 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 ITGA2P17301 1181 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 EPHA8P29322 1005 aaPredicted RBP13.23□□□□□ -0.29
LIMS2-206ENST00000409754 PPP2R1BP30154 601 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 MC3RP41968 323 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 GABRA4P48169 554 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 PRKAG1P54619 331 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 RAB38P57729 211 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 PPP1R8Q12972 351 aaKnown RBP13.23□□□□□ -0.29
LIMS2-206ENST00000409754 GNA13Q14344 377 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 LASP1Q14847 261 aaKnown RBP13.23□□□□□ -0.29
LIMS2-206ENST00000409754 RFX4Q33E94 735 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 RPS26P11Q5JNZ5 115 aaPredicted RBP13.23□□□□□ -0.29
LIMS2-206ENST00000409754 STPG1Q5TH74 334 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 NIPAL1Q6NVV3 410 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 TSEN54Q7Z6J9 526 aaKnown RBP13.23□□□□□ -0.29
LIMS2-206ENST00000409754 GATAD2AQ86YP4 633 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 APLFQ8IW19 511 aaPredicted RBP13.23□□□□□ -0.29
LIMS2-206ENST00000409754 LGI4Q8N135 537 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 NUP43Q8NFH3 380 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 TANKQ92844 425 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 ZDHHC12Q96GR4 267 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 MAGED4Q96JG8 741 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 ZNF607Q96SK3 696 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 EPYCQ99645 322 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 EPB41L1Q9H4G0 881 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 STARD5Q9NSY2 213 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 NDUFAF4Q9P032 175 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 LRIT1Q9P2V4 623 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 PLCL2Q9UPR0 1127 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 SAMHD1Q9Y3Z3 626 aaKnown RBP13.23□□□□□ -0.29
LIMS2-206ENST00000409754 U3KQV3 271 aa13.23□□□□□ -0.29
LIMS2-206ENST00000409754 PRAMEF27A3QJZ7 478 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 ADAMDEC1O15204 470 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 ASNA1O43681 348 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 SLC28A2O43868 658 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 KIF1CO43896 1103 aaKnown RBP13.22□□□□□ -0.29
LIMS2-206ENST00000409754 DIRAS1O95057 198 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 MFN2O95140 757 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 SYPP08247 313 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 GNAO1P09471 354 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 CPMP14384 443 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 PORP16435 677 aaPredicted RBP13.22□□□□□ -0.29
LIMS2-206ENST00000409754 CD247P20963 164 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 PTGER1P34995 402 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 ARRB1P49407 418 aaPredicted RBP13.22□□□□□ -0.29
LIMS2-206ENST00000409754 GFERP55789 205 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 SKP1P63208 163 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 LTB4RQ15722 352 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 NDUFA9Q16795 377 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 PRAMEF8Q5VWM4 474 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 PRAMEF7Q5VXH5 474 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 SLC44A2Q8IWA5 706 aaPredicted RBP13.22□□□□□ -0.29
LIMS2-206ENST00000409754 CARFQ8N187 725 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 SLC25A45Q8N413 288 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 OR5T3Q8NGG3 340 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 OR5D16Q8NGK9 328 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 BBS10Q8TAM1 723 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 SAP25Q8TEE9 199 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 XAGE5Q8WWM1 108 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 RASSF5Q8WWW0 418 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 FBXL20Q96IG2 436 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 TGM7Q96PF1 710 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 ZNF300Q96RE9 604 aaPredicted RBP13.22□□□□□ -0.29
LIMS2-206ENST00000409754 TOR3AQ9H497 397 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 RUBCNLQ9H714 662 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 BCL2L10Q9HD36 194 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 TMEM9BQ9NQ34 198 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 C3orf18Q9UK00 162 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 PCDHGB3Q9Y5G1 929 aa13.22□□□□□ -0.29
LIMS2-206ENST00000409754 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 DPPA5A6NC42 116 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 SGK494L7N484 410 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 HS6ST1O60243 411 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 SERPINB7O75635 380 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 GPR75O95800 540 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms