RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 CTNNB1P35222 781 aa2.91□□□□□ -1.94
PMS1-203ENST00000409593 TCF7P36402 384 aaPredicted RBP2.91□□□□□ -1.94
PMS1-203ENST00000409593 SMSP52788 366 aa2.91□□□□□ -1.94
PMS1-203ENST00000409593 SLC12A3P55017 1021 aa2.91□□□□□ -1.94
PMS1-203ENST00000409593 CDKL1Q00532 357 aa2.91□□□□□ -1.94
PMS1-203ENST00000409593 KLF5Q13887 457 aaPredicted RBP2.91□□□□□ -1.94
PMS1-203ENST00000409593 TCHHL1Q5QJ38 904 aaPredicted RBP2.91□□□□□ -1.94
PMS1-203ENST00000409593 LCE3AQ5TA76 89 aa2.91□□□□□ -1.94
PMS1-203ENST00000409593 CDC42EP5Q6NZY7 148 aa2.91□□□□□ -1.94
PMS1-203ENST00000409593 Q6ZVH6 145 aa2.91□□□□□ -1.94
PMS1-203ENST00000409593 RDH11Q8TC12 318 aa2.91□□□□□ -1.94
PMS1-203ENST00000409593 CFAP36Q96G28 342 aa2.91□□□□□ -1.94
PMS1-203ENST00000409593 RPGRIP1Q96KN7 1286 aa2.91□□□□□ -1.94
PMS1-203ENST00000409593 GANQ9H2C0 597 aa2.91□□□□□ -1.94
PMS1-203ENST00000409593 AKIRIN1Q9H9L7 192 aaPredicted RBP2.91□□□□□ -1.94
PMS1-203ENST00000409593 LIPT1Q9Y234 373 aa2.91□□□□□ -1.94
PMS1-203ENST00000409593 KIF7Q2M1P5 1343 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 IGKV6D-21A0A0A0MT36 114 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 IGHV3-35A0A0C4DH35 117 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 SMIM30A4D0T7 59 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 IGHV3-9P01782 118 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 TRIM23P36406 574 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 TNNT3P45378 269 aaPredicted RBP2.9□□□□□ -1.95
PMS1-203ENST00000409593 ERVPABLB-1P60509 514 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 STX1BP61266 288 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 RPS4XP62701 263 aaKnown RBP2.9□□□□□ -1.95
PMS1-203ENST00000409593 TGIF1Q15583 401 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 FUT11Q495W5 492 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 RHBDD2Q6NTF9 364 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 C11orf88Q6PI97 169 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 ASRGL1Q7L266 308 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 PIWIL3Q7Z3Z3 882 aaKnown RBP2.9□□□□□ -1.95
PMS1-203ENST00000409593 GPR142Q7Z601 462 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 FBXO16Q8IX29 292 aaPredicted RBP2.9□□□□□ -1.95
PMS1-203ENST00000409593 UBQLNLQ8IYU4 475 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 NUS1Q96E22 293 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 CAPNS2Q96L46 248 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 CASD1Q96PB1 797 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 C19orf43Q9BQ61 176 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 IKZF5Q9H5V7 419 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 ASB8Q9H765 288 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 DCTPP1Q9H773 170 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 MAGEF1Q9HAY2 307 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 DNAJC11Q9NVH1 559 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 TRPC4Q9UBN4 977 aa2.9□□□□□ -1.95
PMS1-203ENST00000409593 FRG2CA6NGY1 282 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 A8MX80 341 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 SH2D1BO14796 132 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 ZNF263O14978 683 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 GJB5O95377 273 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 TGDSO95455 350 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 LAMP1P11279 417 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 PVRP15151 417 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 CYP3A5P20815 502 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 HERV-K104P63124 156 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 GK2Q14410 553 aaPredicted RBP2.89□□□□□ -1.95
PMS1-203ENST00000409593 QRICH1Q2TAL8 776 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 C2orf83Q53S99 150 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 MS4A13Q5J8X5 152 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 TAF3Q5VWG9 929 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 PRSS48Q7RTY5 328 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 Q8N9G6 341 aaPredicted RBP2.89□□□□□ -1.95
PMS1-203ENST00000409593 SIDT2Q8NBJ9 832 aaKnown RBP2.89□□□□□ -1.95
PMS1-203ENST00000409593 OR4A16Q8NH70 328 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 EMCNQ9ULC0 261 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 STX8Q9UNK0 236 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 MOKQ9UQ07 419 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 FGD5Q6ZNL6 1462 aa2.89□□□□□ -1.95
PMS1-203ENST00000409593 A0A0A6YYD4 124 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 CYB561D2O14569 222 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 CDX4O14627 284 aaPredicted RBP2.88□□□□□ -1.95
PMS1-203ENST00000409593 SLC7A4O43246 635 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 REC8O95072 547 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 DUSP14O95147 198 aaKnown RBP2.88□□□□□ -1.95
PMS1-203ENST00000409593 OAS1P00973 400 aaKnown RBP2.88□□□□□ -1.95
PMS1-203ENST00000409593 FERP16591 822 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 ACADSBP45954 432 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 ARHGDIBP52566 201 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 ROR1Q01973 937 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 OVGP1Q12889 678 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 MSLNQ13421 630 aaPredicted RBP2.88□□□□□ -1.95
PMS1-203ENST00000409593 KIAA0040Q15053 153 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 HAGHQ16775 308 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 PAN3Q58A45 887 aaKnown RBP2.88□□□□□ -1.95
PMS1-203ENST00000409593 C9orf129Q5T035 196 aaKnown RBP2.88□□□□□ -1.95
PMS1-203ENST00000409593 ADAMTSL5Q6ZMM2 481 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 RAPH1Q70E73 1250 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 MAGEB18Q96M61 343 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 FAM173AQ9BQD7 235 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 JPH2Q9BR39 696 aaPredicted RBP2.88□□□□□ -1.95
PMS1-203ENST00000409593 GPR174Q9BXC1 333 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 OSBPL8Q9BZF1 889 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 TRIM9Q9C026 710 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 MMADHCQ9H3L0 296 aaPredicted RBP2.88□□□□□ -1.95
PMS1-203ENST00000409593 ESM1Q9NQ30 184 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 PNPLA3Q9NST1 481 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 ZCCHC3Q9NUD5 404 aaKnown RBP2.88□□□□□ -1.95
PMS1-203ENST00000409593 ACOXLQ9NUZ1 547 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 TUBGCP4Q9UGJ1 667 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 FBXW2Q9UKT8 454 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms