RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 GPR65Q8IYL9 337 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 SYNPOQ8N3V7 929 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 SLC5A8Q8N695 610 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 OR6P1Q8NGX9 317 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 CEP76Q8TAP6 659 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 PIEZO1Q92508 2521 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 SCRN2Q96FV2 425 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 DOHHQ9BU89 302 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 SPATA5L1Q9BVQ7 753 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 SLC29A3Q9BZD2 475 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 NMUR1Q9HB89 426 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 B3GAT2Q9NPZ5 323 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 SLC35C2Q9NQQ7 365 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 RBM22Q9NW64 420 aaKnown RBP eCLIP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 ACTR10Q9NZ32 417 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 DSPPQ9NZW4 1301 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 REV1Q9UBZ9 1251 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 TRPS1Q9UHF7 1281 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 CORO2BQ9UQ03 480 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 NEU3Q9UQ49 428 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 SF3B6Q9Y3B4 125 aaKnown RBP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 TIMM13Q9Y5L4 95 aaPredicted RBP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 SERTM1A2A2V5 107 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 ISM1B1AKI9 464 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 OR7A17O14581 309 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 AKAP8O43823 692 aaKnown RBP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 PRAF2O60831 178 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 AP2A2O94973 939 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 ADRA2AP08913 450 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 HBQ1P09105 142 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 BPIP17213 487 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 HTR6P50406 440 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 ARSDP51689 593 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 PSMD4P55036 377 aaKnown RBP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 C21orf58P58505 322 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 NTHL1P78549 312 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 CYP4F8P98187 520 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 ALDH6A1Q02252 535 aaKnown RBP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 ADIGQ0VDE8 80 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 ELAVL2Q12926 359 aaKnown RBP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 TEAD4Q15561 434 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 PAQR3Q6TCH7 311 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 SCIMPQ6UWF3 145 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 WASH2PQ6VEQ5 465 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 NUDT18Q6ZVK8 323 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 PTCHD4Q6ZW05 846 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 RAB11FIP2Q7L804 512 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 ZNF551Q7Z340 670 aaPredicted RBP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 PDZD3Q86UT5 571 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 LRRTM3Q86VH5 581 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 PTOV1Q86YD1 416 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 C10orf111Q8N326 155 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 DMBX1Q8NFW5 382 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 OR1M1Q8NGA1 313 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 OR6B3Q8NGW1 331 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 SH3RF2Q8TEC5 729 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 NSMAFQ92636 917 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 KCTD12Q96CX2 325 aaKnown RBP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 GFM1Q96RP9 751 aaKnown RBP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 TRIB3Q96RU7 358 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 NELL2Q99435 816 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 MYOCQ99972 504 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 DPH7Q9BTV6 452 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 RBCK1Q9BYM8 510 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 BRD7Q9NPI1 651 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 PLSCR2Q9NRY7 297 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 KCTD5Q9NXV2 234 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 KLF15Q9UIH9 416 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 ZNF222Q9UK12 451 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 HCN2Q9UL51 889 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 CBLCQ9ULV8 474 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 TMEM5Q9Y2B1 443 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 MED16Q9Y2X0 877 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 SLC6A5Q9Y345 797 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 KMT2EQ8IZD2 1858 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 NUP205Q92621 2012 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 PIPSLA2A3N6 862 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 LINC01387J3KSC0 135 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 NRG2O14511 850 aaPredicted RBP10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 PDCD5O14737 125 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 CCL16O15467 120 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 SUV39H1O43463 412 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 RAD1O60671 282 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 SC5DO75845 299 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 PAPLNO95428 1278 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 S100A8P05109 93 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 C8AP07357 584 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 GABRA5P31644 462 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 SLC6A4P31645 630 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 RENBPP51606 427 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 CRISP1P54107 249 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 DAOAP59103 153 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 RPS14P62263 151 aaKnown RBP10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 RPL38P63173 70 aaKnown RBP10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 ZXDAP98168 799 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 RAB33AQ14088 237 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 ABRAXAS2Q15018 415 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 PTGES3Q15185 160 aaKnown RBP10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 DUOXA1Q1HG43 343 aa10.08□□□□□ -0.8
NIF3L1-204ENST00000409357 MANEALQ5VSG8 457 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms