RNA–Protein interactions for RNA: ENST00000409295.5

COPS7B-205, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best) BASIC

Gene COPS7B, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-205ENST00000409295 LSM1O15116 133 aaKnown RBP13.31□□□□□ -0.28
COPS7B-205ENST00000409295 PEX1O43933 1283 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 PEX11AO75192 247 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 LYPLA1O75608 230 aaPredicted RBP13.31□□□□□ -0.28
COPS7B-205ENST00000409295 OR6B1O95007 311 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 P04436 131 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 CT62P0C5K7 136 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 SOX3P41225 446 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 NR0B1P51843 470 aaKnown RBP13.31□□□□□ -0.28
COPS7B-205ENST00000409295 RPL38P63173 70 aaKnown RBP13.31□□□□□ -0.28
COPS7B-205ENST00000409295 PRICKLE4Q2TBC4 344 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 RFTN2Q52LD8 501 aaPredicted RBP13.31□□□□□ -0.28
COPS7B-205ENST00000409295 FHL5Q5TD97 284 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 ATG16L1Q676U5 607 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 FAM180BQ6P0A1 224 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 FAM111BQ6SJ93 734 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 FAM9CQ8IZT9 166 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 ZNF615Q8N8J6 731 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 OR2T11Q8NH01 316 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 PRR7Q8TB68 274 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 TLCD1Q96CP7 247 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 TUBGCP3Q96CW5 907 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 TAAR6Q96RI8 345 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 HES7Q9BYE0 225 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 WWTR1Q9GZV5 400 aa13.31□□□□□ -0.28
COPS7B-205ENST00000409295 EIF3LQ9Y262 564 aaKnown RBP13.31□□□□□ -0.28
COPS7B-205ENST00000409295 ITM2AO43736 263 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 SKAP2O75563 359 aaPredicted RBP13.3□□□□□ -0.28
COPS7B-205ENST00000409295 CNR1P21554 472 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 NCBP2P52298 156 aaKnown RBP eCLIP13.3□□□□□ -0.28
COPS7B-205ENST00000409295 DCAF7P61962 342 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 RBPJQ06330 500 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 MGAT2Q10469 447 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 MAD2L1Q13257 205 aaPredicted RBP13.3□□□□□ -0.28
COPS7B-205ENST00000409295 EBPQ15125 230 aaKnown RBP13.3□□□□□ -0.28
COPS7B-205ENST00000409295 EIF2S3LQ2VIR3 472 aaKnown RBP13.3□□□□□ -0.28
COPS7B-205ENST00000409295 KRTCAP3Q53RY4 240 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 SLC22A10Q63ZE4 541 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 R3HCC1LQ7Z5L2 792 aaKnown RBP13.3□□□□□ -0.28
COPS7B-205ENST00000409295 ZNF227Q86WZ6 799 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 SULF2Q8IWU5 870 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 GOLM1Q8NBJ4 401 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.3□□□□□ -0.28
COPS7B-205ENST00000409295 ZNF675Q8TD23 568 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 PPCDCQ96CD2 204 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 TSSK3Q96PN8 268 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 PRPF18Q99633 342 aaKnown RBP13.3□□□□□ -0.28
COPS7B-205ENST00000409295 REEP4Q9H6H4 257 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 MAT2BQ9NZL9 334 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 SH3BP4Q9P0V3 963 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 SEC14L3Q9UDX4 400 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 BAIAP2L1Q9UHR4 511 aa13.3□□□□□ -0.28
COPS7B-205ENST00000409295 RP1L1Q8IWN7 2480 aaPredicted RBP13.29□□□□□ -0.28
COPS7B-205ENST00000409295 ATP6AP2A0A1C7CYW4 349 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 MYO1GB0I1T2 1018 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 TP53I11O14683 189 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 AKAP10O43572 662 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 ATP6AP2O75787 350 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 SLITRK5O94991 958 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 PRPS2P11908 318 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 BCKDHAP12694 445 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 PCSK2P16519 638 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 S1PR1P21453 382 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 TACR1P25103 407 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 ARRB2P32121 409 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 RPL3P39023 403 aaKnown RBP13.29□□□□□ -0.28
COPS7B-205ENST00000409295 UQCRFS1P47985 274 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 TMED10P49755 219 aaKnown RBP13.29□□□□□ -0.28
COPS7B-205ENST00000409295 MEOX1P50221 254 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 WDR4P57081 412 aaKnown RBP13.29□□□□□ -0.28
COPS7B-205ENST00000409295 RPP38P78345 283 aaKnown RBP13.29□□□□□ -0.28
COPS7B-205ENST00000409295 PMP22Q01453 160 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 SRSF11Q05519 484 aaKnown RBP13.29□□□□□ -0.28
COPS7B-205ENST00000409295 MRPL49Q13405 166 aaKnown RBP13.29□□□□□ -0.28
COPS7B-205ENST00000409295 EXOSC7Q15024 291 aaKnown RBP13.29□□□□□ -0.28
COPS7B-205ENST00000409295 LTB4RQ15722 352 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 TRMT12Q53H54 448 aaKnown RBP13.29□□□□□ -0.28
COPS7B-205ENST00000409295 C6orf136Q5SQH8 315 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 ZNF324BQ6AW86 544 aaPredicted RBP13.29□□□□□ -0.28
COPS7B-205ENST00000409295 GFRALQ6UXV0 394 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 MDGA2Q7Z553 956 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 ZNF781Q8N8C0 355 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 FNDC5Q8NAU1 212 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 PSD4Q8NDX1 1056 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 FAM13CQ8NE31 585 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 C17orf47Q8NEP4 570 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 OR52R1Q8NGF1 315 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 OR9A2Q8NGT5 310 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 C16orf52Q8NHV5 167 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 KAT2AQ92830 837 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 GFM2Q969S9 779 aaKnown RBP13.29□□□□□ -0.28
COPS7B-205ENST00000409295 CTHRC1Q96CG8 243 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 MTERF3Q96E29 417 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 EGLN2Q96KS0 407 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 FCRL1Q96LA6 429 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 SLX1AQ9BQ83 275 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 ZNF395Q9H8N7 513 aaPredicted RBP13.29□□□□□ -0.28
COPS7B-205ENST00000409295 VIPAS39Q9H9C1 493 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 SACM1LQ9NTJ5 587 aa13.29□□□□□ -0.28
COPS7B-205ENST00000409295 THAP1Q9NVV9 213 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms