RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 RNF167Q9H6Y7 350 aa15.89■□□□□ 0.13
NUP50-203ENST00000407019 DNAJC27Q9NZQ0 273 aa15.89■□□□□ 0.13
NUP50-203ENST00000407019 ATG4BQ9Y4P1 393 aa15.89■□□□□ 0.13
NUP50-203ENST00000407019 AGAP5A6NIR3 686 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 PGRMC2O15173 223 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 PLRG1O43660 514 aaKnown RBP15.88■□□□□ 0.13
NUP50-203ENST00000407019 RNGTTO60942 597 aaKnown RBP15.88■□□□□ 0.13
NUP50-203ENST00000407019 AIFM1O95831 613 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 CHRM4P08173 479 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 CMPK1P30085 196 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 PEBP1P30086 187 aaKnown RBP15.88■□□□□ 0.13
NUP50-203ENST00000407019 PTGER1P34995 402 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 ARFIP1P53367 373 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 FUT5Q11128 374 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 LRRC32Q14392 662 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 LASP1Q14847 261 aaKnown RBP15.88■□□□□ 0.13
NUP50-203ENST00000407019 PODNL1Q6PEZ8 512 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 C19orf48Q6RUI8 117 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 PLEKHG7Q6ZR37 379 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 OLIG3Q7RTU3 272 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 OR56A1Q8NGH5 318 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 KLHL6Q8WZ60 621 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 MOAP1Q96BY2 351 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 CNRIP1Q96F85 164 aaPredicted RBP15.88■□□□□ 0.13
NUP50-203ENST00000407019 NEURL2Q9BR09 285 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 YIPF4Q9BSR8 244 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 C1QTNF7Q9BXJ2 289 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 IGFLR1Q9H665 355 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 ATG2AQ2TAZ0 1938 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 ALPPL2P10696 532 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 CSTF2P33240 577 aaKnown RBP eCLIP15.88■□□□□ 0.13
NUP50-203ENST00000407019 ALDH6A1Q02252 535 aaKnown RBP15.88■□□□□ 0.13
NUP50-203ENST00000407019 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.88■□□□□ 0.13
NUP50-203ENST00000407019 CKAP5Q14008 2032 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 LINC00471Q8N535 108 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 TMEM145Q8NBT3 493 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 OR8J1Q8NGP2 316 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 APOOQ9BUR5 198 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 SARGQ9BW04 601 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 CDADC1Q9BWV3 514 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 SPHK1Q9NYA1 384 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 FBXW2Q9UKT8 454 aa15.88■□□□□ 0.13
NUP50-203ENST00000407019 SCAMP1O15126 338 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 KDM1AO60341 852 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 LGI1O95970 557 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 HMGN2P05204 90 aaKnown RBP15.87■□□□□ 0.13
NUP50-203ENST00000407019 FHP07954 510 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 CERS1P27544 350 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 RHAGQ02094 409 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 DUSP2Q05923 314 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 NDUFA9Q16795 377 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 ZNF750Q32MQ0 723 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 TPRG1LQ5T0D9 272 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 KIAA1211LQ6NV74 962 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 CCDC116Q8IYX3 515 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 MFSD9Q8NBP5 474 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 SRFBP1Q8NEF9 429 aaKnown RBP15.87■□□□□ 0.13
NUP50-203ENST00000407019 TMEM80Q96HE8 168 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 PRRC1Q96M27 445 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 RPL36Q9Y3U8 105 aaKnown RBP15.87■□□□□ 0.13
NUP50-203ENST00000407019 PCDHGA4Q9Y5G9 962 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 HEBP2Q9Y5Z4 205 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 CHD9Q3L8U1 2897 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 CCDC88CQ9P219 2028 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 HEATR5BQ9P2D3 2071 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 A0A0G2JPF8 293 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 SAGE2PA6NJ88 616 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 HNRNPCL2B2RXH8 293 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 HNRNPCL3B7ZW38 293 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 ARHGAP33O14559 1287 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 CASC3O15234 703 aaKnown RBP15.87■□□□□ 0.13
NUP50-203ENST00000407019 UPK1BO75841 260 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 EPPINO95925 133 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 TP53P04637 393 aaPredicted RBP15.87■□□□□ 0.13
NUP50-203ENST00000407019 HNRNPCL4P0DMR1 293 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 TNNI3P19429 210 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 CSNK2A2P19784 350 aaPredicted RBP15.87■□□□□ 0.13
NUP50-203ENST00000407019 S100A5P33763 92 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 TSFMP43897 325 aaKnown RBP15.87■□□□□ 0.13
NUP50-203ENST00000407019 SOX9P48436 509 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 COX10Q12887 443 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 DNASE1L3Q13609 305 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 OCLNQ16625 522 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 GPAT3Q53EU6 434 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 MFSD4BQ5TF39 518 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 C18orf63Q68DL7 685 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 SLC48A1Q6P1K1 146 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 TMEM107Q6UX40 140 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 CD300LDQ6UXZ3 194 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 HMGN2P46Q86SG4 172 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 ATCAYQ86WG3 371 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 OR4K5Q8NGD3 323 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 OR6T1Q8NGN1 323 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 OPALINQ96PE5 141 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 MYADMQ96S97 322 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 TAPBPLQ9BX59 468 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 MKRN2Q9H000 416 aaKnown RBP15.87■□□□□ 0.13
NUP50-203ENST00000407019 KIR3DX1Q9H7L2 352 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 MAN2C1Q9NTJ4 1040 aa15.87■□□□□ 0.13
NUP50-203ENST00000407019 GIMAP4Q9NUV9 329 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms