RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 EMP3P54852 163 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 CDK6Q00534 326 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ZFP36L1Q07352 338 aaKnown RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 DSG2Q14126 1118 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 MAP7Q14244 749 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ZNF267Q14586 743 aaPredicted RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 EXOSC7Q15024 291 aaKnown RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 CEBPEQ15744 281 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 RPS26P11Q5JNZ5 115 aaPredicted RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 MLIPQ5VWP3 458 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 FAAH2Q6GMR7 532 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 RHBDD2Q6NTF9 364 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ZFP1Q6P2D0 407 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ERICH5Q6P6B1 374 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 AAGABQ6PD74 315 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ENPP6Q6UWR7 440 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 DHRS13Q6UX07 377 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 DGAT2L6Q6ZPD8 337 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 FKBP9P1Q75LS8 142 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 OLIG3Q7RTU3 272 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 HMGN2P46Q86SG4 172 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 LAPTM4BQ86VI4 370 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ENDOVQ8N8Q3 282 aaKnown RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 OR56A1Q8NGH5 318 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 PSMA8Q8TAA3 256 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 RIT1Q92963 219 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 TSLPQ969D9 159 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 PMEPA1Q969W9 287 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 TPD52L3Q96J77 140 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 DGAT2Q96PD7 388 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 PRRX2Q99811 253 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 SERHL2Q9H4I8 314 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 AKAP7Q9P0M2 348 aaPredicted RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 STOML1Q9UBI4 398 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ANAPC2Q9UJX6 822 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ANGPTL2Q9UKU9 493 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 MKL2Q9ULH7 1088 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 FAM149AA5PLN7 773 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 HRKO00198 91 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 SLC28A2O43868 658 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 RFPL3O75679 317 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ATP1B1P05026 303 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 C8BP07358 591 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 CT62P0C5K7 136 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 SLC35E2P0CK97 266 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 NR2F1P10589 423 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 SLC7A1P30825 629 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 KDELR2P33947 212 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 RFX3P48380 749 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 HSD17B7P56937 341 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 OCA2Q04671 838 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 TRA2AQ13595 282 aaKnown RBP eCLIP3.47□□□□□ -1.853e-8■■■□□ 18.5
RTN4-208ENST00000404909 TRIP10Q15642 601 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 TRIP6Q15654 476 aaKnown RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 NSDHLQ15738 373 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 CLPPQ16740 277 aaPredicted RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 CYP27C1Q4G0S4 372 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 NKAIN1Q4KMZ8 207 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 STPG1Q5TH74 334 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 RNF111Q6ZNA4 994 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 GPR155Q7Z3F1 870 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 AMIGO2Q86SJ2 522 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 GALNT12Q8IXK2 581 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ADGRG5Q8IZF4 528 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ST13P4Q8IZP2 240 aaPredicted RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 VWA5B2Q8N398 1253 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 SMYD1Q8NB12 490 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 DEFB124Q8NES8 71 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ADAMTS18Q8TE60 1221 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 SLC38A5Q8WUX1 472 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 LRTOMTQ8WZ04 291 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 SLCO4A1Q96BD0 722 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 CDC6Q99741 560 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 EFHD1Q9BUP0 239 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ULBP3Q9BZM4 244 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 CHST8Q9H2A9 424 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 EPS8L2Q9H6S3 715 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 GORASP2Q9H8Y8 452 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 NECTIN3Q9NQS3 549 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 SIDT1Q9NXL6 827 aaKnown RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 SLC39A1Q9NY26 324 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 NINQ8N4C6 2090 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 TEX51A0A1B0GUA7 166 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 TCRBV5S2A0A599 114 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 FER1L5A0AVI2 2057 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 M0QX08 132 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 SSTR4P31391 388 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 PCGF2P35227 344 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 KHKP50053 298 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 DCDP81605 110 aaKnown RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 INSM1Q01101 510 aaPredicted RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 CHRNB3Q05901 458 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 FOXD4Q12950 439 aaPredicted RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 IL11RAQ14626 422 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 SYPL1Q16563 259 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 FXNQ16595 210 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ZNF630Q2M218 657 aaPredicted RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 PRICKLE4Q2TBC4 344 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 FAM98BQ52LJ0 330 aaKnown RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 GPAT3Q53EU6 434 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms