RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 LGI4Q8N135 537 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 C1orf52Q8N6N3 182 aaKnown RBP15.36■□□□□ 0.05
CGREF1-205ENST00000404694 APCDD1LQ8NCL9 501 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 B3GNT7Q8NFL0 401 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 SLC7A6OSQ96CW6 309 aaPredicted RBP15.36■□□□□ 0.05
CGREF1-205ENST00000404694 ZBTB18Q99592 522 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 ZNF717Q9BY31 904 aaPredicted RBP15.36■□□□□ 0.05
CGREF1-205ENST00000404694 C1orf21Q9H246 121 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 ADAP2Q9NPF8 381 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 ABI3Q9P2A4 366 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 MCM8Q9UJA3 840 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 SPACA6W5XKT8 324 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 SYNDIG1LA6NDD5 238 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 H0YHG0 523 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 ANKRD28O15084 1053 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 CTNSO60931 367 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 PRPS1L1P21108 318 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 ST13P50502 369 aaKnown RBP15.36■□□□□ 0.05
CGREF1-205ENST00000404694 SLAMF1Q13291 335 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 TUBA3CQ13748 450 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 INAQ16352 499 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 DPY19L1Q2PZI1 675 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 TUBA3EQ6PEY2 450 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 BLOC1S3Q6QNY0 202 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 FAM180AQ6UWF9 173 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 ZCCHC7Q8N3Z6 543 aaKnown RBP15.36■□□□□ 0.05
CGREF1-205ENST00000404694 LIX1Q8N485 282 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 FAM26EQ8N5C1 309 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 SUN3Q8TAQ9 357 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 BTBD10Q9BSF8 475 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 MRPL1Q9BYD6 325 aaKnown RBP15.36■□□□□ 0.05
CGREF1-205ENST00000404694 DPY30Q9C005 99 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 CDCP1Q9H5V8 836 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 NDE1Q9NXR1 346 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 CCDC167Q9P0B6 97 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 FBXW2Q9UKT8 454 aa15.36■□□□□ 0.05
CGREF1-205ENST00000404694 PTPN13Q12923 2485 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 DOPEY2Q9Y3R5 2298 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 BLACEA4D250 179 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 GABRR3A8MPY1 467 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 PRAMEF2O60811 474 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 LDB3O75112 727 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 NQO1P15559 274 aaKnown RBP15.35■□□□□ 0.05
CGREF1-205ENST00000404694 DDX5P17844 614 aaKnown RBP15.35■□□□□ 0.05
CGREF1-205ENST00000404694 SDC1P18827 310 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 CPN2P22792 545 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 RPL3P39023 403 aaKnown RBP15.35■□□□□ 0.05
CGREF1-205ENST00000404694 KCNK10P57789 538 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 TRA2BP62995 288 aaKnown RBP15.35■□□□□ 0.05
CGREF1-205ENST00000404694 RCAN2Q14206 197 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 ELAVL1Q15717 326 aaKnown RBP15.35■□□□□ 0.05
CGREF1-205ENST00000404694 EIF2S3LQ2VIR3 472 aaKnown RBP15.35■□□□□ 0.05
CGREF1-205ENST00000404694 PAOXQ6QHF9 649 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 IKBIPQ70UQ0 350 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 COMMD6Q7Z4G1 85 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 RPS19BP1Q86WX3 136 aaKnown RBP15.35■□□□□ 0.05
CGREF1-205ENST00000404694 NUDT13Q86X67 352 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 ARHGAP24Q8N264 748 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 FAR1Q8WVX9 515 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 TESCQ96BS2 214 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 SIGLEC12Q96PQ1 595 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 TAAR6Q96RI8 345 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 UTP23Q9BRU9 249 aaKnown RBP15.35■□□□□ 0.05
CGREF1-205ENST00000404694 DDX31Q9H8H2 851 aaKnown RBP15.35■□□□□ 0.05
CGREF1-205ENST00000404694 EFCAB1Q9HAE3 211 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 MS4A12Q9NXJ0 267 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 ANKRD10Q9NXR5 420 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 ZNF223Q9UK11 482 aaPredicted RBP15.35■□□□□ 0.05
CGREF1-205ENST00000404694 PPIEQ9UNP9 301 aaKnown RBP15.35■□□□□ 0.05
CGREF1-205ENST00000404694 DLGAP4Q9Y2H0 992 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 NDUFAF1Q9Y375 327 aa15.35■□□□□ 0.05
CGREF1-205ENST00000404694 HECTD1Q9ULT8 2610 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 HIVEP3Q5T1R4 2406 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 TRBV11-1A0A0K0K1C0 115 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 MYOCOSA0A1B0GUC4 107 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 ANKUB1A6NFN9 424 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 GYG2O15488 501 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 PCDH7O60245 1069 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 IFNA16P05015 189 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 IL6P05231 212 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 ANXA4P09525 319 aaPredicted RBP15.34■□□□□ 0.05
CGREF1-205ENST00000404694 TPP2P29144 1249 aaPredicted RBP15.34■□□□□ 0.05
CGREF1-205ENST00000404694 BSGP35613 385 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 CD96P40200 585 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 CLCN2P51788 898 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 GPR143P51810 404 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 POLR2JP52435 117 aaKnown RBP15.34■□□□□ 0.05
CGREF1-205ENST00000404694 UFM1P61960 85 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 RAE1P78406 368 aaKnown RBP15.34■□□□□ 0.05
CGREF1-205ENST00000404694 TNFRSF17Q02223 184 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 ZNF763Q0D2J5 394 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 STX4Q12846 297 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 DNAL1Q4LDG9 190 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 GPR180Q86V85 440 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 SNX32Q86XE0 403 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 FUNDC1Q8IVP5 155 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 ARMC10Q8N2F6 343 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 BCORP1Q8N888 145 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 ST6GALNAC3Q8NDV1 305 aa15.34■□□□□ 0.05
CGREF1-205ENST00000404694 MDS2Q8NDY4 140 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms