RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 BCDIN3DQ7Z5W3 292 aaKnown RBP10.15□□□□□ -0.78
CLIP4-204ENST00000404424 ZER1Q7Z7L7 766 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 LAPTM4BQ86VI4 370 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 SLC7A5P1Q8MH63 180 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 GDPD1Q8N9F7 314 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 CREB3L4Q8TEY5 395 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 XAGE5Q8WWM1 108 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 FGF11Q92914 225 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 KIAA1143Q96AT1 154 aaPredicted RBP10.15□□□□□ -0.78
CLIP4-204ENST00000404424 LRR1Q96L50 414 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 PRRC1Q96M27 445 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 ZNF582Q96NG8 517 aaPredicted RBP10.15□□□□□ -0.78
CLIP4-204ENST00000404424 WFDC6Q9BQY6 131 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 SERHL2Q9H4I8 314 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 DDX31Q9H8H2 851 aaKnown RBP10.15□□□□□ -0.78
CLIP4-204ENST00000404424 CUEDC1Q9NWM3 386 aaPredicted RBP10.15□□□□□ -0.78
CLIP4-204ENST00000404424 NUP210Q8TEM1 1887 aaPredicted RBP10.14□□□□□ -0.79
CLIP4-204ENST00000404424 EDDM13A0A1B0GTR0 161 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 TMEM129A0AVI4 362 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 PRAMEF27A3QJZ7 478 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 NDUFS4O43181 175 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 TMPRSS11DO60235 418 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 FGBP02675 491 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 ACP2P11117 423 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 DUSP6Q16828 381 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 DEFB115Q30KQ5 88 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 HNRNPA1L2Q32P51 320 aaKnown RBP10.14□□□□□ -0.79
CLIP4-204ENST00000404424 PLK5Q496M5 336 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 ZMAT1Q5H9K5 638 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 C9orf64Q5T6V5 341 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 PAQR6Q6TCH4 344 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 NR4A3Q92570 626 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 AP3S1Q92572 193 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 COX14Q96I36 57 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 KCTD7Q96MP8 289 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 SLC22A4Q9H015 551 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 GLIPR2Q9H4G4 154 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 FGF20Q9NP95 211 aaPredicted RBP10.14□□□□□ -0.79
CLIP4-204ENST00000404424 C5AR2Q9P296 337 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 SNX7Q9UNH6 387 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 DNMT3AQ9Y6K1 912 aaPredicted RBP10.14□□□□□ -0.79
CLIP4-204ENST00000404424 NINQ8N4C6 2090 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 LRRK1Q38SD2 2015 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 FEZF1A0PJY2 475 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 HMX3A6NHT5 357 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 CASC3O15234 703 aaKnown RBP10.14□□□□□ -0.79
CLIP4-204ENST00000404424 HOXC11O43248 304 aaPredicted RBP10.14□□□□□ -0.79
CLIP4-204ENST00000404424 PRODHO43272 600 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 EPHX1P07099 455 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 TSPAN19P0C672 248 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 GPC1P35052 558 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 RCVRNP35243 200 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 ETV5P41161 510 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 KHKP50053 298 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 ETV1P50549 477 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 TPBGQ13641 420 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 ELAVL3Q14576 367 aaKnown RBP10.14□□□□□ -0.79
CLIP4-204ENST00000404424 SNAPC1Q16533 368 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 FAM46CQ5VWP2 391 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 NXNL2Q5VZ03 156 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 OR4C11Q6IEV9 310 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 BHLHB9Q6PI77 547 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 FAM131AQ6UXB0 335 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 ADAMTSL4Q6UY14 1074 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 TMEM64Q6YI46 380 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 LRRTM4Q86VH4 590 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 IQCF1Q8N6M8 205 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 CELF5Q8N6W0 485 aaKnown RBP10.14□□□□□ -0.79
CLIP4-204ENST00000404424 MORN4Q8NDC4 146 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 NEDD4LQ96PU5 975 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 PHOX2BQ99453 314 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 FAIM2Q9BWQ8 316 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 TPK1Q9H3S4 243 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 ABCB9Q9NP78 766 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 MAN2C1Q9NTJ4 1040 aa10.14□□□□□ -0.79
CLIP4-204ENST00000404424 TEX10Q9NXF1 929 aaPredicted RBP10.14□□□□□ -0.79
CLIP4-204ENST00000404424 A0A1W2PQ09 198 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 MEIOCA2RUB1 952 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 FABP12A6NFH5 140 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 H7BY64 318 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 M0R3H8 397 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 SLC30A4O14863 429 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 PLD2O14939 933 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 CLEC3AO75596 197 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 ADH1CP00326 375 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 LINC00271P0C7V0 271 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 MSL3P1P0C860 447 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 IFNGR2P38484 337 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 HNRNPA0Q13151 305 aaKnown RBP10.13□□□□□ -0.79
CLIP4-204ENST00000404424 ATAT1Q5SQI0 421 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 PDZK1Q5T2W1 519 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 DDI2Q5TDH0 399 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 PRAMEF8Q5VWM4 474 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 PRAMEF7Q5VXH5 474 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 METRNLQ641Q3 311 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 ACSM5Q6NUN0 579 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 SLC36A4Q6YBV0 504 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 MRGPREQ86SM8 312 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 IQCHQ86VS3 1027 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 RAB42Q8N4Z0 105 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms