RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 DDCP20711 480 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 KCNJ5P48544 419 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 RPS26P62854 115 aaKnown RBP18.76■□□□□ 0.59
CCDC47-202ENST00000403162 BNC1Q01954 994 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 VITQ6UXI7 678 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 HSDL2Q6YN16 418 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 UTS2BQ765I0 119 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 SLC9B2Q86UD5 537 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 ADIPOR2Q86V24 386 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 CACTIN-AS1Q8N1I8 211 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 SLC7A6Q92536 515 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 KIAA1143Q96AT1 154 aaPredicted RBP18.76■□□□□ 0.59
CCDC47-202ENST00000403162 AP2M1Q96CW1 435 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 RNF170Q96K19 258 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 DMRTB1Q96MA1 342 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 NELL2Q99435 816 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 KXD1Q9BQD3 176 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 PLEKHB1Q9UF11 243 aaPredicted RBP18.76■□□□□ 0.59
CCDC47-202ENST00000403162 CCDC182A6NF36 153 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 A8MV72 311 aaPredicted RBP18.75■□□□□ 0.59
CCDC47-202ENST00000403162 PLD2O14939 933 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 TBX19O60806 448 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 CSF3P09919 207 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 MSL3P1P0C860 447 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 TYRP14679 529 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 DHCR24Q15392 516 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 TAB1Q15750 504 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 CD300LDQ6UXZ3 194 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 DEF8Q6ZN54 512 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 BCDIN3DQ7Z5W3 292 aaKnown RBP18.75■□□□□ 0.59
CCDC47-202ENST00000403162 VWA5B2Q8N398 1253 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 NATD1Q8N6N6 113 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 LMNTD1Q8N9Z9 388 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 ZNF740Q8NDX6 193 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 OR52I1Q8NGK6 324 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 RASSF5Q8WWW0 418 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 SUSD6Q92537 303 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 MED18Q9BUE0 208 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 MMP28Q9H239 520 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 UBE2ZQ9H832 354 aaPredicted RBP18.75■□□□□ 0.59
CCDC47-202ENST00000403162 SLAMF7Q9NQ25 335 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 SEMA3GQ9NS98 782 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 DOCK8Q8NF50 2099 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 MMP20O60882 483 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 ALPPP05187 535 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 FOSL2P15408 326 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 MXD1Q05195 221 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 TARDBPQ13148 414 aaKnown RBP eCLIP18.75■□□□□ 0.592e-6■■■■■ 32.5
CCDC47-202ENST00000403162 HNRNPA0Q13151 305 aaKnown RBP18.75■□□□□ 0.59
CCDC47-202ENST00000403162 CLPPQ16740 277 aaPredicted RBP18.75■□□□□ 0.59
CCDC47-202ENST00000403162 SLC35F1Q5T1Q4 408 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 PARM1Q6UWI2 310 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 USP30Q70CQ3 517 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 DEFB123Q8N688 67 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 OR4D11Q8NGI4 311 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 SLC7A13Q8TCU3 470 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 C17orf50Q8WW18 174 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 SORBS1Q9BX66 1292 aaKnown RBP18.75■□□□□ 0.59
CCDC47-202ENST00000403162 NEUROD4Q9HD90 331 aa18.75■□□□□ 0.59
CCDC47-202ENST00000403162 TESQ9UGI8 421 aaKnown RBP18.75■□□□□ 0.59
CCDC47-202ENST00000403162 EYSQ5T1H1 3165 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 PLXND1Q9Y4D7 1925 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 BRWD1Q9NSI6 2320 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 A0A1W2PQL4 384 aaPredicted RBP18.74■□□□□ 0.59
CCDC47-202ENST00000403162 FABP12A6NFH5 140 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 ANKDD1BA6NHY2 528 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 STK25O00506 426 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 TFECO14948 347 aaPredicted RBP18.74■□□□□ 0.59
CCDC47-202ENST00000403162 PRKYO43930 277 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 XPAP23025 273 aaPredicted RBP18.74■□□□□ 0.59
CCDC47-202ENST00000403162 MMP12P39900 470 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 SLC9A3P48764 834 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 RACK1P63244 317 aaKnown RBP18.74■□□□□ 0.59
CCDC47-202ENST00000403162 COX10Q12887 443 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 TMIGD1Q6UXZ0 262 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 LIPIQ6XZB0 460 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 RBM45Q8IUH3 476 aaKnown RBP18.74■□□□□ 0.59
CCDC47-202ENST00000403162 YAF2Q8IY57 180 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 CFAP206Q8IYR0 622 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 NRSN1Q8IZ57 195 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 SETD7Q8WTS6 366 aaKnown RBP18.74■□□□□ 0.59
CCDC47-202ENST00000403162 TMEM246Q9BRR3 403 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 PLA2G2FQ9BZM2 168 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 C11orf54Q9H0W9 315 aaPredicted RBP18.74■□□□□ 0.59
CCDC47-202ENST00000403162 SLA2Q9H6Q3 261 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 TVP23BQ9NYZ1 205 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 AHSPQ9NZD4 102 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 KIAA1549LQ6ZVL6 1849 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 LILRB5O75023 590 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 GUCY1B2O75343 617 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 ADH1CP00326 375 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 CTSLP07711 333 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 ELFN1P0C7U0 828 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 MANFP55145 182 aaKnown RBP18.74■□□□□ 0.59
CCDC47-202ENST00000403162 NDUFA9Q16795 377 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 GPAT3Q53EU6 434 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 SYT14P1Q58G82 188 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 ZNF805Q5CZA5 627 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 C3orf38Q5JPI3 329 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 PDZK1Q5T2W1 519 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms