RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 GRIN2CQ14957 1233 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 FAM198BQ6UWH4 519 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 KLBQ86Z14 1044 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 APIPQ96GX9 242 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 ZSWIM3Q96MP5 696 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 RBFOX1Q9NWB1 397 aaKnown RBP13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 ZNF780BQ9Y6R6 833 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 GSTM3P21266 225 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 MLLT3P42568 568 aaPredicted RBP13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 PCBP2Q15366 365 aaKnown RBP eCLIP13.91□□□□□ -0.182e-8■■■□□ 17.1
RPRD1A-202ENST00000399022 PRAMEF14Q5SWL7 426 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 PRAMEF13Q5VWM6 474 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 ELP2Q6IA86 826 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 ZNF783Q6ZMS7 281 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 FAM129CQ86XR2 697 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 GPR26Q8NDV2 337 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 TESCQ96BS2 214 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 CLSTN3Q9BQT9 956 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 TMEM45AQ9NWC5 275 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 PROM1O43490 865 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 PIK3CBP42338 1070 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 MASP1P48740 699 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 NTHL1P78549 312 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 C2orf27AQ580R0 203 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 SLC16A12Q6ZSM3 486 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 PM20D2Q8IYS1 436 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 TFGQ92734 400 aaPredicted RBP13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 SLC35G5Q96KT7 338 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 TM9SF2Q99805 663 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 NMNAT1Q9HAN9 279 aaPredicted RBP13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 IKZF2Q9UKS7 526 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 DLGAP4Q9Y2H0 992 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 TEX46H3BTG2 121 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 GFRA2O00451 464 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 ADH5P11766 374 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 CTSEP14091 401 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 IDSP22304 550 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 DOC2AQ14183 400 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 ZNF791Q3KP31 576 aaPredicted RBP13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 NDUFAF5Q5TEU4 345 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 NXNL2Q5VZ03 156 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 VITQ6UXI7 678 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 ZNF782Q6ZMW2 699 aaPredicted RBP13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 NLGN4XQ8N0W4 816 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 TMIEQ8NEW7 156 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 CDADC1Q9BWV3 514 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 ZNF471Q9BX82 626 aaPredicted RBP13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 TTTY10Q9BZA0 68 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 OR51I1Q9H343 314 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 NDOR1Q9UHB4 597 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 GPR52Q9Y2T5 361 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 PRSS21Q9Y6M0 314 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 HLA-DQA2P01906 255 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 HMGN1P05114 100 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 LAMP2P13473 410 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 ZNF30P17039 623 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 PVALBP20472 110 aaPredicted RBP13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 KELP23276 732 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 FAM180BQ6P0A1 224 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 HMGN2P46Q86SG4 172 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 PARGQ86W56 976 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 YIPF6Q96EC8 236 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 IL17FQ96PD4 163 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 MCCC1Q96RQ3 725 aaPredicted RBP13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 LINC00597Q9H2U6 94 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 B3GNT2Q9NY97 397 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 ZNF780AO75290 641 aaPredicted RBP13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 TRIM3O75382 744 aaPredicted RBP13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 SLC22A5O76082 557 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 ALDOBP05062 364 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 SRCP12931 536 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 SYN1P17600 705 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 RPS19P39019 145 aaKnown RBP13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 CRISP3P54108 245 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 HTRA3P83110 453 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 FCN2Q15485 313 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 SLC35F1Q5T1Q4 408 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 FRMPD2BQ6IN97 320 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 ZCCHC10Q8TBK6 192 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 EPYCQ99645 322 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 TRMT61BQ9BVS5 477 aaKnown RBP13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 OR10A4Q9H209 315 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 KLHL21Q9UJP4 597 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 F5P12259 2224 aa13.9□□□□□ -0.18
RPRD1A-202ENST00000399022 A0A075B6Q4 140 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 ARPC5O15511 151 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 TGM5O43548 720 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 RHCEP18577 417 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 TMIGD1Q6UXZ0 262 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 DLEU7Q6UYE1 221 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 PDZD3Q86UT5 571 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 REM2Q8IYK8 340 aaPredicted RBP13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 IL17RDQ8NFM7 739 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 OR6F1Q8NGZ6 308 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 ZFAND1Q8TCF1 268 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 ZNF419Q96HQ0 510 aaPredicted RBP13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 HRASLS5Q96KN8 279 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 OSGIN1Q9UJX0 560 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 SLC27A6Q9Y2P4 619 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 TARM1B6A8C7 271 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms