RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.36□□□□□ -0.43
VCX3A-202ENST00000398729 ACANP16112 2415 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 OR14I1A6ND48 311 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 MANBAO00462 879 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 GLRA3O75311 464 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 ULK1O75385 1050 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 CT62P0C5K7 136 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 PIGAP37287 484 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 MAGEA5P43359 124 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 KIR3DL1P43629 444 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 NR0B1P51843 470 aaKnown RBP12.35□□□□□ -0.43
VCX3A-202ENST00000398729 PKNOX1P55347 436 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 TRA2BP62995 288 aaKnown RBP12.35□□□□□ -0.43
VCX3A-202ENST00000398729 KCNJ2P63252 427 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 FOXO1Q12778 655 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 CSTF3Q12996 717 aaKnown RBP12.35□□□□□ -0.43
VCX3A-202ENST00000398729 LCP2Q13094 533 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 SLC10A1Q14973 349 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 HYAL4Q2M3T9 481 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 TCHHL1Q5QJ38 904 aaPredicted RBP12.35□□□□□ -0.43
VCX3A-202ENST00000398729 PRAMEF20Q5VT98 475 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 SPNS3Q6ZMD2 512 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 FBXW8Q8N3Y1 598 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 C1orf52Q8N6N3 182 aaKnown RBP12.35□□□□□ -0.43
VCX3A-202ENST00000398729 LRRN4CLQ8ND94 238 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 OR7G1Q8NGA0 311 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 OR10G3Q8NGC4 313 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 MZB1Q8WU39 189 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 UBLCP1Q8WVY7 318 aaPredicted RBP12.35□□□□□ -0.43
VCX3A-202ENST00000398729 SDCCAG3Q96C92 435 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 TM4SF18Q96CE8 201 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 CCDC126Q96EE4 140 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 SMC6Q96SB8 1091 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 OR10A5Q9H207 317 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 LDAHQ9H6V9 325 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 PPCSQ9HAB8 311 aa12.35□□□□□ -0.43
VCX3A-202ENST00000398729 BOKQ9UMX3 212 aaPredicted RBP12.35□□□□□ -0.43
VCX3A-202ENST00000398729 ATP6AP2A0A1C7CYW4 349 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 CCDC151A5D8V7 595 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 NPIPA2E9PIF3 369 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 NPIPA3F8WFD2 350 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 TP53I11O14683 189 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 BCKDKO14874 412 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 ERAL1O75616 437 aaKnown RBP12.34□□□□□ -0.43
VCX3A-202ENST00000398729 ATP6AP2O75787 350 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 IGHG3P01860 377 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 ATP1B1P05026 303 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 ENO1P06733 434 aaKnown RBP12.34□□□□□ -0.43
VCX3A-202ENST00000398729 CSNK2A2P19784 350 aaPredicted RBP12.34□□□□□ -0.43
VCX3A-202ENST00000398729 ALDH9A1P49189 494 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 TMED10P49755 219 aaKnown RBP12.34□□□□□ -0.43
VCX3A-202ENST00000398729 NRG3P56975 720 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 NTRK2Q16620 822 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 GXYLT1Q4G148 440 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 TBCELQ5QJ74 424 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 TRILQ7L0X0 811 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 VWA5B2Q8N398 1253 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 ZNF615Q8N8J6 731 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 GBP7Q8N8V2 638 aaPredicted RBP12.34□□□□□ -0.43
VCX3A-202ENST00000398729 ZNF441Q8N8Z8 693 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 C17orf47Q8NEP4 570 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 OR5M3Q8NGP4 307 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 CA5BP1Q8WTZ4 195 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 CHTF18Q8WVB6 975 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 DOHHQ9BU89 302 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 BRINP2Q9C0B6 783 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 MCM8Q9UJA3 840 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 CES1P1Q9UKY3 287 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 CFL2Q9Y281 166 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 HRH3Q9Y5N1 445 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 NPFFR2Q9Y5X5 522 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 CHCHD2Q9Y6H1 151 aaPredicted RBP12.34□□□□□ -0.43
VCX3A-202ENST00000398729 ZNF780BQ9Y6R6 833 aa12.34□□□□□ -0.43
VCX3A-202ENST00000398729 A0A1B0GVC2 190 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 A0A1W2PPM1 405 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 FIGNL2A6NMB9 653 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 AQP7O14520 342 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 SUSD5O60279 629 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 ESRRBO95718 433 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 SHBGP04278 402 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 MYL2P10916 166 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 KRT15P19012 456 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 FEN1P39748 380 aaKnown RBP12.33□□□□□ -0.44
VCX3A-202ENST00000398729 MAN2A2P49641 1150 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 NAA20P61599 178 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 MAP4K2Q12851 820 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 RPS6KA2Q15349 733 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 PRICKLE4Q2TBC4 344 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 SPIN4Q56A73 249 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 FAM219BQ5XKK7 198 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 TMEM64Q6YI46 380 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 MMP21Q8N119 569 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 CCNYL1Q8N7R7 359 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 RND1Q92730 232 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 DIO2Q92813 273 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 ADIPOR1Q96A54 375 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 KLHL29Q96CT2 875 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 JSRP1Q96MG2 331 aaPredicted RBP12.33□□□□□ -0.44
VCX3A-202ENST00000398729 ACPTQ9BZG2 426 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 EXO5Q9H790 373 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms