RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 NT5EP21589 574 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 NTSP30990 170 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 SOX11P35716 441 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 CLDN8P56748 225 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 GNGT1P63211 74 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 LTB4RQ15722 352 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 R3HCC1LQ7Z5L2 792 aaKnown RBP23.65■■□□□ 1.38
U2AF1-203ENST00000398137 RIMKLAQ8IXN7 391 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 SAMD14Q8IZD0 417 aaPredicted RBP23.65■■□□□ 1.38
U2AF1-203ENST00000398137 CATSPER1Q8NEC5 780 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 B3GNT7Q8NFL0 401 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 RIT1Q92963 219 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 CHMP6Q96FZ7 201 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 ZNF764Q96H86 408 aaPredicted RBP23.65■■□□□ 1.38
U2AF1-203ENST00000398137 OR8D2Q9GZM6 311 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 TAS2R7Q9NYW3 318 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 SH3BP4Q9P0V3 963 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 ATP6V1HQ9UI12 483 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 SPTAN1Q13813 2472 aaKnown RBP23.65■■□□□ 1.38
U2AF1-203ENST00000398137 MAST4O15021 2626 aa23.64■■□□□ 1.38
U2AF1-203ENST00000398137 TBX19O60806 448 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 DDAH2O95865 285 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 ITGAMP11215 1152 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 GP1BBP13224 206 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 RPL3P39023 403 aaKnown RBP23.64■■□□□ 1.37
U2AF1-203ENST00000398137 MFAP5Q13361 173 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 ISLR2Q6UXK2 745 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 LINC00696Q6ZRV3 163 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 GALNT12Q8IXK2 581 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 KIF2BQ8N4N8 673 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 SLC2A12Q8TD20 617 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 NCLNQ969V3 563 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 CIDECQ96AQ7 238 aaPredicted RBP23.64■■□□□ 1.37
U2AF1-203ENST00000398137 MTERF3Q96E29 417 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 CNPPD1Q9BV87 410 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 TMEM120AQ9BXJ8 343 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 DPY30Q9C005 99 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 CXorf21Q9HAI6 301 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 KCNK13Q9HB14 408 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 GPR45Q9Y5Y3 372 aa23.64■■□□□ 1.37
U2AF1-203ENST00000398137 COPG1Q9Y678 874 aaKnown RBP23.64■■□□□ 1.37
U2AF1-203ENST00000398137 HRKO00198 91 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 ANKRD28O15084 1053 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 PDPK1O15530 556 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 DYRK3O43781 588 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 AGFG2O95081 481 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 ATP1B1P05026 303 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 ICAM2P13598 275 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 IDO1P14902 403 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 LSP1P33241 339 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 SEC24CP53992 1094 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 C21orf58P58505 322 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 ZNF267Q14586 743 aaPredicted RBP23.63■■□□□ 1.37
U2AF1-203ENST00000398137 MPEG1Q2M385 716 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 SPRED3Q2MJR0 410 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 C6orf163Q5TEZ5 329 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 CCDC116Q8IYX3 515 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 FAM9CQ8IZT9 166 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 ZNF321PQ8N8H1 164 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 MORN4Q8NDC4 146 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 ADCY4Q8NFM4 1077 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 OR9A2Q8NGT5 310 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 SUN3Q8TAQ9 357 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 M1APQ8TC57 530 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 BRIX1Q8TDN6 353 aaKnown RBP23.63■■□□□ 1.37
U2AF1-203ENST00000398137 LMF1Q96S06 567 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 BRINP2Q9C0B6 783 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 MMP25Q9NPA2 562 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 ERVK-19Q9WJR5 959 aa23.63■■□□□ 1.37
U2AF1-203ENST00000398137 TRBV11-1A0A0K0K1C0 115 aa23.62■■□□□ 1.37
U2AF1-203ENST00000398137 MYO1GB0I1T2 1018 aa23.62■■□□□ 1.37
U2AF1-203ENST00000398137 CT62P0C5K7 136 aa23.62■■□□□ 1.37
U2AF1-203ENST00000398137 LAMP1P11279 417 aa23.62■■□□□ 1.37
U2AF1-203ENST00000398137 EFNA1P20827 205 aaPredicted RBP23.62■■□□□ 1.37
U2AF1-203ENST00000398137 GALNSP34059 522 aa23.62■■□□□ 1.37
U2AF1-203ENST00000398137 NCBP2P52298 156 aaKnown RBP eCLIP23.62■■□□□ 1.37
U2AF1-203ENST00000398137 UFM1P61960 85 aa23.62■■□□□ 1.37
U2AF1-203ENST00000398137 RPS6KA2Q15349 733 aa23.62■■□□□ 1.37
U2AF1-203ENST00000398137 CEBPEQ15744 281 aa23.62■■□□□ 1.37
U2AF1-203ENST00000398137 IRAK1BP1Q5VVH5 260 aa23.62■■□□□ 1.37
U2AF1-203ENST00000398137 APCDD1LQ8NCL9 501 aa23.62■■□□□ 1.37
U2AF1-203ENST00000398137 STON2Q8WXE9 905 aa23.62■■□□□ 1.37
U2AF1-203ENST00000398137 RILPQ96NA2 401 aa23.62■■□□□ 1.37
U2AF1-203ENST00000398137 PPIEQ9UNP9 301 aaKnown RBP23.62■■□□□ 1.37
U2AF1-203ENST00000398137 NAV2Q8IVL1 2488 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 CROCCQ5TZA2 2017 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 C9JVG2 144 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 DDX5P17844 614 aaKnown RBP23.61■■□□□ 1.37
U2AF1-203ENST00000398137 GPR143P51810 404 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 ZNF169Q14929 603 aaPredicted RBP23.61■■□□□ 1.37
U2AF1-203ENST00000398137 GSTA3Q16772 222 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 PDCD4Q53EL6 469 aaKnown RBP23.61■■□□□ 1.37
U2AF1-203ENST00000398137 CPTPQ5TA50 214 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 B3GNTL1Q67FW5 361 aaPredicted RBP23.61■■□□□ 1.37
U2AF1-203ENST00000398137 HIST2H2BCQ6DN03 193 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 FAM111BQ6SJ93 734 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 SIRT6Q8N6T7 355 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 PRR7Q8TB68 274 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 ZNF721Q8TF20 911 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 SSC4DQ8WTU2 575 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms