RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 SLC35G5Q96KT7 338 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 NSMCE2Q96MF7 247 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 LRFN5Q96NI6 719 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 CMKLR1Q99788 373 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 THUMPD1Q9NXG2 353 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 MAT2BQ9NZL9 334 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 NINQ8N4C6 2090 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 GSTA4O15217 222 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 CREG1O75629 220 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 ARAFP10398 606 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 STT3AP46977 705 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 MAPK10P53779 464 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 DSTNP60981 165 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 MRPS22P82650 360 aaKnown RBP18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 MRPS35P82673 323 aaKnown RBP18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 STX4Q12846 297 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 MAP4K2Q12851 820 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 SERTAD2Q14140 314 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 MAP7Q14244 749 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 ZNF630Q2M218 657 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 NKAIN1Q4KMZ8 207 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 EXOSC6Q5RKV6 272 aaKnown RBP18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 NUP43Q8NFH3 380 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 PYDC1Q8WXC3 89 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 PELOQ9BRX2 385 aaKnown RBP18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 ALOXE3Q9BYJ1 711 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 STRADBQ9C0K7 418 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 CXorf21Q9HAI6 301 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 A4GALTQ9NPC4 353 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 OLAHQ9NV23 265 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 AKAP7Q9P0M2 348 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 STX18Q9P2W9 335 aaKnown RBP18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 ZNF639Q9UID6 485 aa18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 FAF1Q9UNN5 650 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-205ENST00000397761 HMGN4O00479 90 aa18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 CPNE3O75131 537 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 GMNNO75496 209 aa18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 CDC123O75794 336 aaPredicted RBP18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 HMGN2P05204 90 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 UMPSP11172 480 aa18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 MAOAP21397 527 aa18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 SOX11P35716 441 aa18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 MAN2A2P49641 1150 aa18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 CASP9P55211 416 aa18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 RPS26P62854 115 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 AP2B1P63010 937 aa18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 RHAGQ02094 409 aa18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 RCN1Q15293 331 aa18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 FAM111BQ6SJ93 734 aa18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 CEACAM20Q6UY09 585 aa18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 FIG4Q92562 907 aa18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 POP5Q969H6 163 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 CLIP3Q96DZ5 547 aa18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 MS4A4EQ96PG1 132 aa18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 SLC7A5P2Q9GIP4 190 aa18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 NECTIN3Q9NQS3 549 aa18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 NKX1-2Q9UD57 310 aaPredicted RBP18.22■□□□□ 0.51
PDLIM2-205ENST00000397761 PTPRBP23467 1997 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 AGRPO00253 132 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 ASNA1O43681 348 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 GPIP06744 558 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 S1PR1P21453 382 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 SLC7A1P30825 629 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 KHKP50053 298 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 DCDP81605 110 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 MYBPC3Q14896 1274 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 TRMT12Q53H54 448 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 TNFAIP8L2Q6P589 184 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 DGAT2L6Q6ZPD8 337 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 SLC30A8Q8IWU4 369 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 ADGRG5Q8IZF4 528 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 LGI4Q8N135 537 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 NETO1Q8TDF5 533 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 HOXB13Q92826 284 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 MAL2Q969L2 176 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 SLCO4A1Q96BD0 722 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 RBM18Q96H35 190 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 RSRC1Q96IZ7 334 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 CTRCQ99895 268 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 SLC26A1Q9H2B4 701 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 CCM2LQ9NUG4 571 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 DCAF13Q9NV06 445 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 DDX18Q9NVP1 670 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 CTSFQ9UBX1 484 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 ZNF451Q9Y4E5 1061 aa18.21■□□□□ 0.51
PDLIM2-205ENST00000397761 SYNDIG1LA6NDD5 238 aa18.2■□□□□ 0.5
PDLIM2-205ENST00000397761 OR2W5A6NFC9 320 aa18.2■□□□□ 0.5
PDLIM2-205ENST00000397761 H0Y3Z8 333 aa18.2■□□□□ 0.5
PDLIM2-205ENST00000397761 OR10H2O60403 315 aa18.2■□□□□ 0.5
PDLIM2-205ENST00000397761 GCM2O75603 506 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-205ENST00000397761 RECKO95980 971 aa18.2■□□□□ 0.5
PDLIM2-205ENST00000397761 MT-CO3P00414 261 aa18.2■□□□□ 0.5
PDLIM2-205ENST00000397761 TFPTP0C1Z6 253 aa18.2■□□□□ 0.5
PDLIM2-205ENST00000397761 CT62P0C5K7 136 aa18.2■□□□□ 0.5
PDLIM2-205ENST00000397761 NT5EP21589 574 aa18.2■□□□□ 0.5
PDLIM2-205ENST00000397761 MATN1P21941 496 aa18.2■□□□□ 0.5
PDLIM2-205ENST00000397761 PRIM2P49643 509 aa18.2■□□□□ 0.5
PDLIM2-205ENST00000397761 ANXA11P50995 505 aaKnown RBP18.2■□□□□ 0.5
PDLIM2-205ENST00000397761 EFNA3P52797 238 aa18.2■□□□□ 0.5
PDLIM2-205ENST00000397761 RAB15P59190 212 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms