RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 A0A0A6YYC8 382 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 WASHC1A8K0Z3 465 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 I3L1I5 382 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 LRP3O75074 770 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 CREG1O75629 220 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 MED26O95402 600 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 GSNP06396 782 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 HOXB9P17482 250 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 CPN2P22792 545 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 CRHBPP24387 322 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 SOX11P35716 441 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 BUD31P41223 144 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 GZMMP51124 257 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 ABHD18Q0P651 414 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 LRRC74AQ0VAA2 488 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 FAM53BQ14153 422 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 SPIDRQ14159 915 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 FAM180BQ6P0A1 224 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 HIPK1Q86Z02 1210 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 NATD1Q8N6N6 113 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 OR1L3Q8NH93 324 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 REXO5Q96IC2 774 aaKnown RBP18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 TOR3AQ9H497 397 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 ENAMQ9NRM1 1142 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 SLC6A13Q9NSD5 602 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 MS4A12Q9NXJ0 267 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 TAS2R7Q9NYW3 318 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 SERTAD3Q9UJW9 196 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 PCDHB14Q9Y5E9 798 aa18.2■□□□□ 0.5
PDLIM2-204ENST00000397760 C4orf47A7E2U8 309 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 D6RAR5 112 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 H3BMH7 237 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 FOXS1O43638 330 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 NR2F6P10588 404 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 NBL1P41271 181 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 GTDC1Q4AE62 458 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 ENPP6Q6UWR7 440 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 GPR135Q8IZ08 494 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 OR5T3Q8NGG3 340 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 FBXO30Q8TB52 745 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 FANCEQ9HB96 536 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 FGF21Q9NSA1 209 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 UTS2RQ9UKP6 389 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 FAF1Q9UNN5 650 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 ERVK-11Q9UQG0 969 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 A0A1W2PRB8 838 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 GNGT2O14610 69 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 PDPK1O15530 556 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 RDH16O75452 317 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 PTPN6P29350 595 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 TLX1P31314 330 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 ITGA1P56199 1179 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 SKP1P63208 163 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 TNFRSF17Q02223 184 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 FAM214AQ32MH5 1076 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 PHF19Q5T6S3 580 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 GPR107Q5VW38 600 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 NIPAL1Q6NVV3 410 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 SLC48A1Q6P1K1 146 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 ZNF621Q6ZSS3 439 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 SLITRK4Q8IW52 837 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 CA13Q8N1Q1 262 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 OR4A15Q8NGL6 344 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 RAB2BQ8WUD1 216 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 ZNF501Q96CX3 271 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 FAM120BQ96EK7 910 aaKnown RBP18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 IKZF5Q9H5V7 419 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 GPN2Q9H9Y4 310 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 SPACA6W5XKT8 324 aa18.19■□□□□ 0.5
PDLIM2-204ENST00000397760 SH3PXD2BA1X283 911 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 AGRPO00253 132 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 CBFA2T3O75081 653 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 PRKD3O94806 890 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 ATE1O95260 518 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 C6orf47O95873 294 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 MAGEA2P43356 314 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 RAD23AP54725 363 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 ACY1Q03154 408 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 C6orf141Q5SZD1 244 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 FAM86B1Q8N7N1 296 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 FNDC8Q8TC99 324 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 PYURFQ96I23 114 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 CSF3RQ99062 836 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 SOX17Q9H6I2 414 aaPredicted RBP18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 SLC35C2Q9NQQ7 365 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 CUTCQ9NTM9 273 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 GALNT8Q9NY28 637 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 CES1P1Q9UKY3 287 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 CLCA2Q9UQC9 943 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 HCN4Q9Y3Q4 1203 aa18.18■□□□□ 0.5
PDLIM2-204ENST00000397760 SLC16A6O15403 523 aa18.17■□□□□ 0.5
PDLIM2-204ENST00000397760 ERAL1O75616 437 aaKnown RBP18.17■□□□□ 0.5
PDLIM2-204ENST00000397760 NSA2O95478 260 aaKnown RBP18.17■□□□□ 0.5
PDLIM2-204ENST00000397760 EEF1B2P24534 225 aaKnown RBP18.17■□□□□ 0.5
PDLIM2-204ENST00000397760 RYKP34925 604 aa18.17■□□□□ 0.5
PDLIM2-204ENST00000397760 AVPR1BP47901 424 aa18.17■□□□□ 0.5
PDLIM2-204ENST00000397760 NKG7Q16617 165 aa18.17■□□□□ 0.5
PDLIM2-204ENST00000397760 ZIK1Q3SY52 487 aaPredicted RBP18.17■□□□□ 0.5
PDLIM2-204ENST00000397760 RALGAPA1Q6GYQ0 2036 aa18.17■□□□□ 0.5
PDLIM2-204ENST00000397760 SERPINA11Q86U17 422 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms