RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 SPATA9Q9BWV2 254 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 AKIRIN1Q9H9L7 192 aaPredicted RBP22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 ASCL3Q9NQ33 180 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 SLC6A13Q9NSD5 602 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 NEUROG3Q9Y4Z2 214 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 CLCA3PQ9Y6N3 262 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 CNOT3O75175 753 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 EEFSECP57772 596 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 OR4D2P58180 307 aa22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 CAMK2BQ13554 666 aa22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 ANGPTL8Q6UXH0 198 aa22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 SHISA6Q6ZSJ9 500 aa22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 SZRD1Q7Z422 152 aa22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 MARCH9Q86YJ5 346 aa22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 TMEM151BQ8IW70 566 aa22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 OR52N2Q8NGI0 321 aa22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 OR5AK3PQ8NH89 298 aa22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 TMEM125Q96AQ2 219 aa22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 NACC2Q96BF6 587 aa22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 ECSITQ9BQ95 431 aa22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 THTPAQ9BU02 230 aa22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 CADM1Q9BY67 442 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 TRIM4Q9C037 500 aa22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 PNO1Q9NRX1 252 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 THUMPD1Q9NXG2 353 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 KCND3Q9UK17 655 aa22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 ERVK-11Q9UQG0 969 aa22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 FARSAQ9Y285 508 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-202ENST00000397396 PIEZO1Q92508 2521 aa22.02■■□□□ 1.12
TSPAN4-202ENST00000397396 C17orf105B2RV13 164 aa22.02■■□□□ 1.12
TSPAN4-202ENST00000397396 MTPNP58546 118 aa22.02■■□□□ 1.12
TSPAN4-202ENST00000397396 DNASE1L3Q13609 305 aa22.02■■□□□ 1.12
TSPAN4-202ENST00000397396 TP53BP2Q13625 1128 aa22.02■■□□□ 1.12
TSPAN4-202ENST00000397396 TMEM205Q6UW68 189 aa22.02■■□□□ 1.12
TSPAN4-202ENST00000397396 SLC15A3Q8IY34 581 aa22.02■■□□□ 1.12
TSPAN4-202ENST00000397396 NUP43Q8NFH3 380 aa22.02■■□□□ 1.12
TSPAN4-202ENST00000397396 ADCY4Q8NFM4 1077 aa22.02■■□□□ 1.12
TSPAN4-202ENST00000397396 OR7G1Q8NGA0 311 aa22.02■■□□□ 1.12
TSPAN4-202ENST00000397396 KAT2AQ92830 837 aa22.02■■□□□ 1.12
TSPAN4-202ENST00000397396 PPWD1Q96BP3 646 aaKnown RBP22.02■■□□□ 1.12
TSPAN4-202ENST00000397396 SLC35G5Q96KT7 338 aa22.02■■□□□ 1.12
TSPAN4-202ENST00000397396 C19orf53Q9UNZ5 99 aaPredicted RBP22.02■■□□□ 1.12
TSPAN4-202ENST00000397396 AK5Q9Y6K8 562 aa22.02■■□□□ 1.12
TSPAN4-202ENST00000397396 OR2W5A6NFC9 320 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 PRAMEF2O60811 474 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 KLF7O75840 302 aaPredicted RBP22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 SOX30O94993 753 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 LIPCP11150 499 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 GPX2P18283 190 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 PRIM2P49643 509 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 FOXC1Q12948 553 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 RABL3Q5HYI8 236 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 ZCCHC12Q6PEW1 402 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 C6orf120Q7Z4R8 191 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 ANKRD37Q7Z713 158 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 KIF2BQ8N4N8 673 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 MORN4Q8NDC4 146 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 TNIP2Q8NFZ5 429 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 OR7G2Q8NG99 324 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 KIAA1143Q96AT1 154 aaPredicted RBP22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 AURKBQ96GD4 344 aaPredicted RBP22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 EFHD1Q9BUP0 239 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 EPS8L2Q9H6S3 715 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 KAT8Q9H7Z6 458 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 ZNF639Q9UID6 485 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 TCFL5Q9UL49 500 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 FAF1Q9UNN5 650 aaPredicted RBP22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 CFL2Q9Y281 166 aa22.01■■□□□ 1.11
TSPAN4-202ENST00000397396 MYOCOSA0A1B0GUC4 107 aa22■■□□□ 1.11
TSPAN4-202ENST00000397396 UPK1AO00322 258 aa22■■□□□ 1.11
TSPAN4-202ENST00000397396 DLSTP36957 453 aa22■■□□□ 1.11
TSPAN4-202ENST00000397396 MRPS35P82673 323 aaKnown RBP22■■□□□ 1.11
TSPAN4-202ENST00000397396 MGAT2Q10469 447 aa22■■□□□ 1.11
TSPAN4-202ENST00000397396 FHL5Q5TD97 284 aa22■■□□□ 1.11
TSPAN4-202ENST00000397396 SERPINA11Q86U17 422 aa22■■□□□ 1.11
TSPAN4-202ENST00000397396 IL22RA1Q8N6P7 574 aa22■■□□□ 1.11
TSPAN4-202ENST00000397396 FBXL20Q96IG2 436 aa22■■□□□ 1.11
TSPAN4-202ENST00000397396 MAGED4Q96JG8 741 aa22■■□□□ 1.11
TSPAN4-202ENST00000397396 CNPPD1Q9BV87 410 aa22■■□□□ 1.11
TSPAN4-202ENST00000397396 ALG2Q9H553 416 aa22■■□□□ 1.11
TSPAN4-202ENST00000397396 CMTM6Q9NX76 183 aa22■■□□□ 1.11
TSPAN4-202ENST00000397396 COPS7AQ9UBW8 275 aa22■■□□□ 1.11
TSPAN4-202ENST00000397396 PCDHGA6Q9Y5G7 932 aa22■■□□□ 1.11
TSPAN4-202ENST00000397396 SDK2Q58EX2 2172 aa21.99■■□□□ 1.11
TSPAN4-202ENST00000397396 TTC36A6NLP5 189 aa21.99■■□□□ 1.11
TSPAN4-202ENST00000397396 NME4O00746 187 aa21.99■■□□□ 1.11
TSPAN4-202ENST00000397396 AGR2O95994 175 aa21.99■■□□□ 1.11
TSPAN4-202ENST00000397396 HSD17B1P14061 328 aa21.99■■□□□ 1.11
TSPAN4-202ENST00000397396 MMP11P24347 488 aa21.99■■□□□ 1.11
TSPAN4-202ENST00000397396 KHKP50053 298 aa21.99■■□□□ 1.11
TSPAN4-202ENST00000397396 PGDP52209 483 aa21.99■■□□□ 1.11
TSPAN4-202ENST00000397396 PRKAG1P54619 331 aa21.99■■□□□ 1.11
TSPAN4-202ENST00000397396 FUT7Q11130 342 aa21.99■■□□□ 1.11
TSPAN4-202ENST00000397396 ZNF267Q14586 743 aaPredicted RBP21.99■■□□□ 1.11
TSPAN4-202ENST00000397396 RGNQ15493 299 aa21.99■■□□□ 1.11
TSPAN4-202ENST00000397396 SFT2D3Q587I9 215 aa21.99■■□□□ 1.11
TSPAN4-202ENST00000397396 ERICH5Q6P6B1 374 aa21.99■■□□□ 1.11
TSPAN4-202ENST00000397396 FAM111BQ6SJ93 734 aa21.99■■□□□ 1.11
TSPAN4-202ENST00000397396 GPR155Q7Z3F1 870 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms