RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 LRRC17Q8N6Y2 441 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 OR5D16Q8NGK9 328 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 CPEB1Q9BZB8 566 aaKnown RBP13.95□□□□□ -0.18
CCNF-202ENST00000397066 SPNS1Q9H2V7 528 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 TAS2R7Q9NYW3 318 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 SLC35F4A4IF30 521 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 CD8B2A6NJW9 211 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 FOXE1O00358 373 aaPredicted RBP13.95□□□□□ -0.18
CCNF-202ENST00000397066 ZNF780AO75290 641 aaPredicted RBP13.95□□□□□ -0.18
CCNF-202ENST00000397066 C1orf105O95561 183 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 CD8BP10966 210 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 PRAMEF14Q5SWL7 426 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 PRAMEF13Q5VWM6 474 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 ZNF730Q6ZMV8 503 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 Q6ZNB5 142 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 TIGD4Q8IY51 512 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 TM9SF4Q92544 642 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 PDXPQ96GD0 296 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 SLC35G5Q96KT7 338 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 ZCCHC3Q9NUD5 404 aaKnown RBP13.95□□□□□ -0.18
CCNF-202ENST00000397066 P2RX2Q9UBL9 471 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 C2orf92A0A1B0GVN3 265 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 PLA2G10O15496 165 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 ALPPP05187 535 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 UQCRC1P31930 480 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 SLC16A1P53985 500 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 EEF1A2Q05639 463 aaKnown RBP13.95□□□□□ -0.18
CCNF-202ENST00000397066 OCLNQ16625 522 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 CST9Q5W186 159 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 PLCZ1Q86YW0 608 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 ZNF557Q8N988 423 aaPredicted RBP13.95□□□□□ -0.18
CCNF-202ENST00000397066 GPR32P1Q8NGA4 272 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 ZFAND1Q8TCF1 268 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 ABCG4Q9H172 646 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 MED28Q9H204 178 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 EGLN3Q9H6Z9 239 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 ING4Q9UNL4 249 aa13.95□□□□□ -0.18
CCNF-202ENST00000397066 VWA8A3KMH1 1905 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 GSAPA4D1B5 854 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 LEFTY2O00292 366 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 ICMTO60725 284 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 CPEP16870 476 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 ITGB7P26010 798 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 CDH11P55287 796 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 COX10Q12887 443 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 P2RY14Q15391 338 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 CCSAPQ6IQ19 270 aaPredicted RBP13.94□□□□□ -0.18
CCNF-202ENST00000397066 ZNF770Q6IQ21 691 aaPredicted RBP13.94□□□□□ -0.18
CCNF-202ENST00000397066 C17orf64Q86WR6 236 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 ZBED6CLQ96FA7 236 aaPredicted RBP13.94□□□□□ -0.18
CCNF-202ENST00000397066 POLDIP3Q9BY77 421 aaKnown RBP13.94□□□□□ -0.18
CCNF-202ENST00000397066 TMEM39AQ9NV64 488 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 MOSPD1Q9UJG1 213 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 A0A1W2PQ45 241 aaPredicted RBP13.94□□□□□ -0.18
CCNF-202ENST00000397066 A0A1W2PQY0 241 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 HLA-DPB1P04440 258 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 MMP11P24347 488 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 PTGER1P34995 402 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 IFNGR2P38484 337 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 GPR1P46091 355 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 LIMK1P53667 647 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 SRP54P61011 504 aaKnown RBP13.94□□□□□ -0.18
CCNF-202ENST00000397066 RNASE12Q5GAN4 147 aaKnown RBP13.94□□□□□ -0.18
CCNF-202ENST00000397066 FAM209AQ5JX71 171 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 C12orf73Q69YU5 71 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 SDE2Q6IQ49 451 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 LUZP2Q86TE4 346 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 TMEM25Q86YD3 366 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 NLGN4YQ8NFZ3 816 aaPredicted RBP13.94□□□□□ -0.18
CCNF-202ENST00000397066 SMPDL3AQ92484 453 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 ZCCHC2Q9C0B9 1178 aaKnown RBP13.94□□□□□ -0.18
CCNF-202ENST00000397066 GALNT9Q9HCQ5 603 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 NEUROD4Q9HD90 331 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 ACOXLQ9NUZ1 547 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 HS3ST2Q9Y278 367 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 CCDC88CQ9P219 2028 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 PI15O43692 258 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 ABLIM3O94929 683 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 MSL3P1P0C860 447 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 HLA-DMAP28067 261 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 PCDH1Q08174 1060 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 ZNF791Q3KP31 576 aaPredicted RBP13.94□□□□□ -0.18
CCNF-202ENST00000397066 BICRALQ6AI39 1079 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 SLC27A4Q6P1M0 643 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 VN1R5Q7Z5H4 357 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 ABI3BPQ7Z7G0 1075 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 TMEM150AQ86TG1 271 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 SLC43A3Q8NBI5 491 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 GALNT6Q8NCL4 622 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 AKAP1Q92667 903 aaKnown RBP eCLIP13.94□□□□□ -0.182e-6■■■■■ 29.3
CCNF-202ENST00000397066 TREX2Q9BQ50 279 aaPredicted RBP13.94□□□□□ -0.18
CCNF-202ENST00000397066 SPATA5L1Q9BVQ7 753 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 OR51I1Q9H343 314 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 KLHL21Q9UJP4 597 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 ITM2BQ9Y287 266 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 PRKAB1Q9Y478 270 aa13.94□□□□□ -0.18
CCNF-202ENST00000397066 PQBP1O60828 265 aaKnown RBP13.93□□□□□ -0.18
CCNF-202ENST00000397066 ALPPL2P10696 532 aa13.93□□□□□ -0.18
CCNF-202ENST00000397066 ENDOUP21128 410 aaKnown RBP13.93□□□□□ -0.18
CCNF-202ENST00000397066 NDUFA9Q16795 377 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms