RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 MTDHQ86UE4 582 aaKnown RBP9.61□□□□□ -0.87
NEDD8-202ENST00000396828 SULF2Q8IWU5 870 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.61□□□□□ -0.87
NEDD8-202ENST00000396828 LGI4Q8N135 537 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 CA13Q8N1Q1 262 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 MARVELD2Q8N4S9 558 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 TMEM178AQ8NBL3 297 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 APCDD1LQ8NCL9 501 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 TRPV3Q8NET8 790 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 HUS1BQ8NHY5 278 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 CREB3L4Q8TEY5 395 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 DMRTA2Q96SC8 542 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 HBEGFQ99075 208 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 SERPINI1Q99574 410 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 CENPKQ9BS16 269 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 ACPTQ9BZG2 426 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 RUBCNLQ9H714 662 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 TRIM45Q9H8W5 580 aaPredicted RBP9.61□□□□□ -0.87
NEDD8-202ENST00000396828 LIN28AQ9H9Z2 209 aaKnown RBP9.61□□□□□ -0.87
NEDD8-202ENST00000396828 C1orf109Q9NX04 203 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 VPS29Q9UBQ0 182 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 ITGB1BP2Q9UKP3 347 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 SLC12A4Q9UP95 1085 aa9.61□□□□□ -0.87
NEDD8-202ENST00000396828 MTORP42345 2549 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 MYOCOSA0A1B0GUC4 107 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 PINLYPA6NC86 204 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 TMEM200CA6NKL6 621 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 FCHO1O14526 889 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 LSM1O15116 133 aaKnown RBP9.6□□□□□ -0.87
NEDD8-202ENST00000396828 HS6ST1O60243 411 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 CLEC3AO75596 197 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 MYO1DO94832 1006 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 ABOP16442 354 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 PCSK2P16519 638 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 ZNF24P17028 368 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 JAK1P23458 1154 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 PRPH2P23942 346 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 MAPK1P28482 360 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 TRHRP34981 398 aaPredicted RBP9.6□□□□□ -0.87
NEDD8-202ENST00000396828 MEOX1P50221 254 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 HLCSP50747 726 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 GPR143P51810 404 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 SMSP52788 366 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 TAS2R50P59544 299 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 GPR85P60893 370 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 STX1BP61266 288 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 RPS13P62277 151 aaKnown RBP9.6□□□□□ -0.87
NEDD8-202ENST00000396828 ERVK-8P63133 956 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 HMGCS1Q01581 520 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 EMX2Q04743 252 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 RGS1Q08116 209 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 RPS6KA2Q15349 733 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 AP5B1Q2VPB7 878 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 SPIN4Q56A73 249 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 TOR1AIP1Q5JTV8 583 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 C6orf136Q5SQH8 315 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 FAM219BQ5XKK7 198 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 ADNP2Q6IQ32 1131 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 OGFOD2Q6N063 350 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 Q6ZSR9 355 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 CHSY3Q70JA7 882 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 TRPM8Q7Z2W7 1104 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 ARMC10Q8N2F6 343 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 GHDCQ8N2G8 530 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 RPRMLQ8N4K4 120 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 FNDC5Q8NAU1 212 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 ACBD4Q8NC06 268 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 OR2T11Q8NH01 316 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 CMTM7Q96FZ5 175 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 METTL2AQ96IZ6 378 aaKnown RBP9.6□□□□□ -0.87
NEDD8-202ENST00000396828 LRTM1Q9HBL6 345 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 DMRT3Q9NQL9 472 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 PRDM9Q9NQV7 894 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 AHSPQ9NZD4 102 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 NOP53Q9NZM5 478 aaKnown RBP9.6□□□□□ -0.87
NEDD8-202ENST00000396828 PPT2Q9UMR5 302 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 EIF3LQ9Y262 564 aaKnown RBP9.6□□□□□ -0.87
NEDD8-202ENST00000396828 TMED5Q9Y3A6 229 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 CCL27Q9Y4X3 112 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 EML6Q6ZMW3 1958 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 C2CD3Q4AC94 2353 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 ZNF407Q9C0G0 2248 aa9.6□□□□□ -0.87
NEDD8-202ENST00000396828 TRBV11-1A0A0K0K1C0 115 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 A0A1B0GTH9 108 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 CCT8L1PA6NM43 557 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 NPIPB8E9PQR5 432 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 TGFB1P01137 390 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 IDO1P14902 403 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 HNRNPH1P31943 449 aaKnown RBP9.59□□□□□ -0.87
NEDD8-202ENST00000396828 RAP1GDS1P52306 607 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 RPL38P63173 70 aaKnown RBP9.59□□□□□ -0.87
NEDD8-202ENST00000396828 BTN3A2P78410 334 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 ACSM2AQ08AH3 577 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 CUL3Q13618 768 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 SQLEQ14534 574 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 GSTA3Q16772 222 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 TMEM35AQ53FP2 167 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 CMPK2Q5EBM0 449 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 EMC4Q5J8M3 183 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 ACSM2BQ68CK6 577 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms