RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 CES4AQ5XG92 561 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 NOXRED1Q6NXP6 359 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 OPN5Q6U736 354 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 IKBIPQ70UQ0 350 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 SLC29A4Q7RTT9 530 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 NUDCD3Q8IVD9 361 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 SIAH3Q8IW03 269 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 DND1Q8IYX4 353 aaKnown RBP12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 LRRC25Q8N386 305 aaPredicted RBP12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 GOLM1Q8NBJ4 401 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 POGLUT1Q8NBL1 392 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 FAM98AQ8NCA5 519 aaKnown RBP12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 C17orf47Q8NEP4 570 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 DOK4Q8TEW6 326 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 TWIST2Q8WVJ9 160 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 ADIPOR1Q96A54 375 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 TP53INP1Q96A56 240 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 ZNF764Q96H86 408 aaPredicted RBP12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 SGCZQ96LD1 299 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 EBPLQ9BY08 206 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 WWTR1Q9GZV5 400 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 STMN4Q9H169 189 aaPredicted RBP12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 OR10A5Q9H207 317 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 LRTM1Q9HBL6 345 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 TMBIM4Q9HC24 238 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 SH2D2AQ9NP31 389 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 TIMMDC1Q9NPL8 285 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 SLC35C2Q9NQQ7 365 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 HPF1Q9NWY4 346 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 UTS2RQ9UKP6 389 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 EXO1Q9UQ84 846 aaKnown RBP12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 PTGDR2Q9Y5Y4 395 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 ZNF780BQ9Y6R6 833 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 PCNX3Q9H6A9 2034 aa12.35□□□□□ -0.43
HLA-DMA-202ENST00000395303 TMEM233B4DJY2 109 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 KLRC4-KLRK1H3BQV0 150 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 LSM1O15116 133 aaKnown RBP12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 SEMA7AO75326 666 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 SEC22BO75396 215 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 AGFG2O95081 481 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 DDCP20711 480 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 NT5EP21589 574 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 SLC18A1P54219 525 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 XKR7Q5GH72 579 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 SH2D4BQ5SQS7 431 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 FHL5Q5TD97 284 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 C6orf163Q5TEZ5 329 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 FAM111BQ6SJ93 734 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 IL20RBQ6UXL0 311 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 MDGA2Q7Z553 956 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 VWA5B2Q8N398 1253 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 ZFP62Q8NB50 900 aaPredicted RBP12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 PSD4Q8NDX1 1056 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 C16orf52Q8NHV5 167 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 SLC22A8Q8TCC7 542 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 SSC4DQ8WTU2 575 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 TLCD1Q96CP7 247 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 ERP27Q96DN0 273 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 PKNOX2Q96KN3 472 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 CCT7Q99832 543 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 CENPHQ9H3R5 247 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 ZDHHC2Q9UIJ5 367 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 HAO1Q9UJM8 370 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 ERVK-11Q9UQG0 969 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 TMED5Q9Y3A6 229 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 FIS1Q9Y3D6 152 aa12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 POLR3HQ9Y535 204 aaPredicted RBP12.34□□□□□ -0.43
HLA-DMA-202ENST00000395303 ARHGAP21Q5T5U3 1957 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 MYO1GB0I1T2 1018 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 TMEM114B3SHH9 223 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 PIP5K1BO14986 540 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 PEX1O43933 1283 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 TBX19O60806 448 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 SNUPNO95149 360 aaKnown RBP12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 CBX7O95931 251 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 SERPINE1P05121 402 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 FBXO45P0C2W1 286 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 LINC00032P0C843 101 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 GPX3P22352 226 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 GRK2P25098 689 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 TACR1P25103 407 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 C2orf80Q0P641 193 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 DUSP8Q13202 625 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 CHI3L2Q15782 390 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 PRSS53Q2L4Q9 553 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 EIF2S3LQ2VIR3 472 aaKnown RBP12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 KRTCAP3Q53RY4 240 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 ZNF628Q5EBL2 1059 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 RTL4Q6ZR62 310 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 SULF2Q8IWU5 870 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 EXOSC8Q96B26 276 aaKnown RBP12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 SPACA9Q96E40 222 aaPredicted RBP12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 EGLN2Q96KS0 407 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 DEPPQ9NTK1 212 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 GIMAP4Q9NUV9 329 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 CFL2Q9Y281 166 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 CACNA1CQ13936 2221 aa12.33□□□□□ -0.44
HLA-DMA-202ENST00000395303 ABCA12Q86UK0 2595 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms