RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 UTP23Q9BRU9 249 aaKnown RBP18.47■□□□□ 0.55
SNCA-203ENST00000394986 HES7Q9BYE0 225 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 OR10A5Q9H207 317 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 TAS2R7Q9NYW3 318 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 SH3BP4Q9P0V3 963 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 MYOTQ9UBF9 498 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 DTX4Q9Y2E6 619 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 CPAMD8Q8IZJ3 1885 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 ZNF462Q96JM2 2506 aa18.47■□□□□ 0.55
SNCA-203ENST00000394986 FCHO1O14526 889 aa18.46■□□□□ 0.55
SNCA-203ENST00000394986 SCAMP2O15127 329 aaKnown RBP18.46■□□□□ 0.55
SNCA-203ENST00000394986 SLC28A2O43868 658 aa18.46■□□□□ 0.55
SNCA-203ENST00000394986 ZNF354AO60765 605 aaPredicted RBP18.46■□□□□ 0.55
SNCA-203ENST00000394986 NME6O75414 186 aaPredicted RBP18.46■□□□□ 0.55
SNCA-203ENST00000394986 CBX7O95931 251 aa18.46■□□□□ 0.55
SNCA-203ENST00000394986 LBPP18428 481 aa18.46■□□□□ 0.55
SNCA-203ENST00000394986 EFNA1P20827 205 aaPredicted RBP18.46■□□□□ 0.55
SNCA-203ENST00000394986 NTSP30990 170 aa18.46■□□□□ 0.55
SNCA-203ENST00000394986 CASRP41180 1078 aa18.46■□□□□ 0.55
SNCA-203ENST00000394986 MLLT10P55197 1068 aa18.46■□□□□ 0.55
SNCA-203ENST00000394986 MAD2L1Q13257 205 aaPredicted RBP18.46■□□□□ 0.55
SNCA-203ENST00000394986 ZNF169Q14929 603 aaPredicted RBP18.46■□□□□ 0.55
SNCA-203ENST00000394986 EBPQ15125 230 aaKnown RBP18.46■□□□□ 0.55
SNCA-203ENST00000394986 TLR1Q15399 786 aa18.46■□□□□ 0.55
SNCA-203ENST00000394986 LARP4Q71RC2 724 aaKnown RBP eCLIP18.46■□□□□ 0.55
SNCA-203ENST00000394986 FAM9CQ8IZT9 166 aa18.46■□□□□ 0.55
SNCA-203ENST00000394986 OR7A2PQ8NGA2 310 aa18.46■□□□□ 0.55
SNCA-203ENST00000394986 MAGEB18Q96M61 343 aa18.46■□□□□ 0.55
SNCA-203ENST00000394986 AMDHD1Q96NU7 426 aa18.46■□□□□ 0.55
SNCA-203ENST00000394986 WWTR1Q9GZV5 400 aa18.46■□□□□ 0.55
SNCA-203ENST00000394986 GLIPR2Q9H4G4 154 aa18.46■□□□□ 0.55
SNCA-203ENST00000394986 ASIC5Q9NY37 505 aa18.46■□□□□ 0.55
SNCA-203ENST00000394986 NOP53Q9NZM5 478 aaKnown RBP18.46■□□□□ 0.55
SNCA-203ENST00000394986 BCAP29Q9UHQ4 241 aa18.46■□□□□ 0.55
SNCA-203ENST00000394986 ZNF639Q9UID6 485 aa18.46■□□□□ 0.55
SNCA-203ENST00000394986 TRPC5OSA6NMA1 111 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 SLCO1B7G3V0H7 640 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 ZNF195O14628 629 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 PDPK1O15530 556 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 VPS4BO75351 444 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 ALDOCP09972 364 aaKnown RBP18.45■□□□□ 0.54
SNCA-203ENST00000394986 MPIP34949 423 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 HPCAL1P37235 193 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 OR1C1Q15619 314 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 SMU1Q2TAY7 513 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 SPINK14Q6IE38 97 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 SLC29A4Q7RTT9 530 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 ZNF551Q7Z340 670 aaPredicted RBP18.45■□□□□ 0.54
SNCA-203ENST00000394986 OR52R1Q8NGF1 315 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 OR5L2Q8NGL0 311 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 C16orf52Q8NHV5 167 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 ZNF675Q8TD23 568 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 CTHRC1Q96CG8 243 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 RASL10BQ96S79 203 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.45■□□□□ 0.54
SNCA-203ENST00000394986 ATP6V1HQ9UI12 483 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 PCDHGA10Q9Y5H3 936 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 USH1CQ9Y6N9 552 aa18.45■□□□□ 0.54
SNCA-203ENST00000394986 TRAV17A0A0B4J275 112 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 TTLL8A6PVC2 850 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 ATP8B1O43520 1251 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 TBX19O60806 448 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 NEURL1O76050 574 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 SOX3P41225 446 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 SSR4P51571 173 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 NXNQ6DKJ4 435 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 TMEM107Q6UX40 140 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 ZNF227Q86WZ6 799 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 TMEM156Q8N614 296 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 MDS2Q8NDY4 140 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 OR7G2Q8NG99 324 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 OR7G1Q8NGA0 311 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 NUBPLQ8TB37 319 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 ZNF764Q96H86 408 aaPredicted RBP18.44■□□□□ 0.54
SNCA-203ENST00000394986 TRIM4Q9C037 500 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 MED4Q9NPJ6 270 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 KLHL1Q9NR64 748 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 LRFN1Q9P244 771 aa18.44■□□□□ 0.54
SNCA-203ENST00000394986 YARS2Q9Y2Z4 477 aaKnown RBP18.44■□□□□ 0.54
SNCA-203ENST00000394986 OR6C76A6NM76 312 aa18.43■□□□□ 0.54
SNCA-203ENST00000394986 OR6B1O95007 311 aa18.43■□□□□ 0.54
SNCA-203ENST00000394986 NADKO95544 446 aaPredicted RBP18.43■□□□□ 0.54
SNCA-203ENST00000394986 LAMP1P11279 417 aa18.43■□□□□ 0.54
SNCA-203ENST00000394986 TRHRP34981 398 aaPredicted RBP18.43■□□□□ 0.54
SNCA-203ENST00000394986 MC3RP41968 323 aa18.43■□□□□ 0.54
SNCA-203ENST00000394986 CYB561P49447 251 aa18.43■□□□□ 0.54
SNCA-203ENST00000394986 HLCSP50747 726 aa18.43■□□□□ 0.54
SNCA-203ENST00000394986 HSPB3Q12988 150 aa18.43■□□□□ 0.54
SNCA-203ENST00000394986 NNATQ16517 81 aa18.43■□□□□ 0.54
SNCA-203ENST00000394986 RIMKLAQ8IXN7 391 aa18.43■□□□□ 0.54
SNCA-203ENST00000394986 MTERF3Q96E29 417 aa18.43■□□□□ 0.54
SNCA-203ENST00000394986 MAELQ96JY0 434 aaKnown RBP18.43■□□□□ 0.54
SNCA-203ENST00000394986 OR52B2Q96RD2 323 aa18.43■□□□□ 0.54
SNCA-203ENST00000394986 ITPAQ9BY32 194 aa18.43■□□□□ 0.54
SNCA-203ENST00000394986 C2orf92A0A1B0GVN3 265 aa18.42■□□□□ 0.54
SNCA-203ENST00000394986 PRAMEF2O60811 474 aa18.42■□□□□ 0.54
SNCA-203ENST00000394986 DIAPH2O60879 1101 aa18.42■□□□□ 0.54
SNCA-203ENST00000394986 GPX3P22352 226 aa18.42■□□□□ 0.54
SNCA-203ENST00000394986 NME5P56597 212 aa18.42■□□□□ 0.54
SNCA-203ENST00000394986 TLE1Q04724 770 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms