RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 HMGN4O00479 90 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 TEX28O15482 410 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 AKAP8O43823 692 aaKnown RBP9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 ORC5O43913 435 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 PRKYO43930 277 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 GUCY1B2O75343 617 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 ADRA2AP08913 450 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 TYRP14679 529 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 NTSP30990 170 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 PCBP4P57723 403 aaKnown RBP9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 ST8SIA6P61647 398 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 MXD1Q05195 221 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 ANGPT1Q15389 498 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 CRTC2Q53ET0 693 aaPredicted RBP9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 RPS26P11Q5JNZ5 115 aaPredicted RBP9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 BICRALQ6AI39 1079 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 C22orf42Q6IC83 251 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 SLC27A4Q6P1M0 643 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 CNKSR3Q6P9H4 555 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 ADIPOR2Q86V24 386 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 FAM129CQ86XR2 697 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 TMEM25Q86YD3 366 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 TBC1D19Q8N5T2 526 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 OR7G1Q8NGA0 311 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 OR4K5Q8NGD3 323 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 SUN3Q8TAQ9 357 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 SLC7A13Q8TCU3 470 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 SFXN5Q8TD22 340 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 WFIKKN2Q8TEU8 576 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 OTULINQ96BN8 352 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 TM4SF18Q96CE8 201 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 COQ10AQ96MF6 247 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 MS4A8Q9BY19 250 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 BTBD1Q9H0C5 482 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 KRCC1Q9NPI7 259 aaPredicted RBP9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 SPHK2Q9NRA0 654 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 MED17Q9NVC6 651 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 RBFOX1Q9NWB1 397 aaKnown RBP9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 CALML5Q9NZT1 146 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 SLC13A4Q9UKG4 626 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 ITM2BQ9Y287 266 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 MAU2Q9Y6X3 613 aa9.51□□□□□ -0.89
UBE2D3-208ENST00000394803 A0A0G2JPF8 293 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 A0A1W2PRU2 124 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 PRR23AA6NEV1 266 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 HNRNPCL2B2RXH8 293 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 HNRNPCL3B7ZW38 293 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 CASKO14936 926 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 KLHL18O94889 574 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 PRNPP04156 253 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 HNRNPCL4P0DMR1 293 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 GPC1P35052 558 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 FEN1P39748 380 aaKnown RBP9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 MTNR1AP48039 350 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 CCR8P51685 355 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 ACSM1Q08AH1 577 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 DSG2Q14126 1118 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 SF3A2Q15428 464 aaKnown RBP9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 TCTN1Q2MV58 587 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 YIF1BQ5BJH7 314 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 PODNL1Q6PEZ8 512 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 CD200R1LQ6Q8B3 271 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 TMEM64Q6YI46 380 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 ZNF767PQ75MW2 155 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 CAMKK1Q8N5S9 505 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 DUSP18Q8NEJ0 188 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 TTLQ8NG68 377 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 UBASH3BQ8TF42 649 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 NUS1Q96E22 293 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 RNFT2Q96EX2 444 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 ZFYVE19Q96K21 471 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 DMRTB1Q96MA1 342 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 SLC6A18Q96N87 628 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 TREX2Q9BQ50 279 aaPredicted RBP9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 PINK1Q9BXM7 581 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 MIXL1Q9H2W2 232 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 WASH6PQ9NQA3 447 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 PAK6Q9NQU5 681 aaPredicted RBP9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 SAGE1Q9NXZ1 904 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 MRPL39Q9NYK5 338 aaKnown RBP9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 A4GNTQ9UNA3 340 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 BRCA2P51587 3418 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 DOCK6Q96HP0 2047 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 SYT5O00445 386 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 PLPP1O14494 284 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 SLC9A3R1O14745 358 aaPredicted RBP9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 C1QBP02746 253 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 ETV5P41161 510 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 GPR1P46091 355 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 ETV1P50549 477 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 ARPC4P59998 168 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 DMPKQ09013 629 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 HSPB3Q12988 150 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 SLAMF1Q13291 335 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 GPR19Q15760 415 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 ZMAT1Q5H9K5 638 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 ASTLQ6HA08 431 aaPredicted RBP9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 RRM2BQ7LG56 351 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 PRICKLE2Q7Z3G6 844 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 ZNF438Q7Z4V0 828 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms